RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 OR4F17Q8NGA8 305 aa12.24□□□□□ -0.45
SEMA4D-219ENST00000486935 CD300LFQ8TDQ1 290 aa12.24□□□□□ -0.45
SEMA4D-219ENST00000486935 GLYATL2Q8WU03 294 aa12.24□□□□□ -0.45
SEMA4D-219ENST00000486935 OR4F4Q96R69 305 aa12.24□□□□□ -0.45
SEMA4D-219ENST00000486935 TMEM222Q9H0R3 208 aa12.24□□□□□ -0.45
SEMA4D-219ENST00000486935 WNK1Q9H4A3 2382 aa12.24□□□□□ -0.45
SEMA4D-219ENST00000486935 OR2F2O95006 317 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 DUS4LO95620 317 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 PRB2P02812 416 aaPredicted RBP12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 IGKV1-16P04430 117 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 FAM106CPP0CH98 169 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 CD1BP29016 333 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 HNF4GQ14541 408 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 OXLD1Q5BKU9 147 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 C9orf152Q5JTZ5 239 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 TMEM268Q5VZI3 342 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 Q6ZNX1 250 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 ZNF695Q8IW36 515 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 LGI3Q8N145 548 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 COQ8AQ8NI60 647 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 LHFPL5Q8TAF8 219 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 FLYWCH2Q96CP2 140 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 PHB2Q99623 299 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 TGP01266 2768 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 NOTCH1P46531 2555 aa12.23□□□□□ -0.45
SEMA4D-219ENST00000486935 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 C7orf66A4D0T2 115 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 SNRPGP15A8MWD9 76 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 SHOXO15266 292 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 RBFOX2O43251 390 aaKnown RBP eCLIP12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 HPRT1P00492 218 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 AMY1AP04745 511 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 RPA2P15927 270 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 SRPXP78539 464 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 CD83Q01151 205 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 SELENOHQ8IZQ5 122 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 C12orf45Q8N5I9 185 aaPredicted RBP12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 RNASE11Q8TAA1 199 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 MITD1Q8WV92 249 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 HARBI1Q96MB7 349 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 OR51J1Q9H342 316 aa12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 FAM212BQ9NTI7 297 aaPredicted RBP12.22□□□□□ -0.45
SEMA4D-219ENST00000486935 TCRBV4S1A1TA0A5B7 111 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 SSNA1O43805 119 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 MOSP00540 346 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 IGKV1-39P01597 117 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 IGKV1D-39P04432 117 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 TMEM11P17152 192 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 G6PCP35575 357 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 ERVK-16P61578 105 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 TMEM177Q53S58 311 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 TCTEX1D4Q5JR98 221 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 KPRPQ5T749 579 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 OR2T10Q8NGZ9 312 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 RBPMSQ93062 196 aaKnown RBP12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 EAF1Q96JC9 268 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 RITA1Q96K30 269 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 PLEKHA2Q9HB19 425 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 COMMD9Q9P000 198 aa12.21□□□□□ -0.45
SEMA4D-219ENST00000486935 FAM90A9PA6NNJ1 464 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 M0QZK8 103 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 CDS2O95674 445 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 HOXB5P09067 269 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 AKR1C2P52895 323 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 SSX9Q7RTT3 188 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 VKORC1L1Q8N0U8 176 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 SLC35G3Q8N808 338 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 DMBX1Q8NFW5 382 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 OSR1Q8TAX0 266 aaPredicted RBP12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 TMEM56Q96MV1 263 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 TMEM56-RWDD3S4R434 201 aa12.2□□□□□ -0.46
SEMA4D-219ENST00000486935 PRKDCP78527 4128 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 A0A0B4J2A0 478 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 A0A1B0GVG6 124 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 HRASP01112 189 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 KRASP01116 189 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 PF4V1P10720 104 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 NQO2P16083 231 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 CNTFRP26992 372 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 C10orf99Q6UWK7 81 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 LYZL2Q7Z4W2 148 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 SHPKQ9UHJ6 478 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 MOB4Q9Y3A3 225 aa12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 TSSC4Q9Y5U2 329 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-219ENST00000486935 MARCH11A6NNE9 402 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 SRRM4A7MD48 611 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 CCSO14618 274 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 ADAP1O75689 374 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 ATG12O94817 140 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 IGKV1-5P01602 117 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 CD33P20138 364 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 EBI3Q14213 229 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 MMDQ15546 238 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 KHDC1LQ5JSQ8 128 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 LRTM2Q8N967 370 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 OR4X2Q8NGF9 303 aa12.18□□□□□ -0.46
SEMA4D-219ENST00000486935 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms