RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ZNF841Q6ZN19 808 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 OR10G4Q8NGN3 311 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 OR13D1Q8NGV5 346 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 OR5B3Q8NH48 314 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 H1FXQ92522 213 aaKnown RBP9.77□□□□□ -0.85
PKP4-213ENST00000486254 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 FBXO7Q9Y3I1 522 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 COL6A6A6NMZ7 2263 aa9.77□□□□□ -0.85
PKP4-213ENST00000486254 PRSS46E5RG02 174 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 H0YJW9 148 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 OR2B8PP59922 312 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 DEFA5Q01523 94 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 C11orf42Q8N5U0 333 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 VSTM2AQ8TAG5 236 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 TIMD4Q96H15 378 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 KCNIP2Q9NS61 270 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 WDR83OSQ9Y284 106 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 FAM96BQ9Y3D0 163 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 ADGRG4Q8IZF6 3080 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 PKD1L2Q7Z442 2459 aa9.76□□□□□ -0.85
PKP4-213ENST00000486254 UBE2L5PA0A1B0GUS4 154 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 hCG_1809904A0A1W2PP81 198 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 A0A1W2PPE2 198 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 A0A1W2PPE3 182 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 A0A1W2PR64 198 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 A0A1W2PRV1 198 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 C17orf112F2Z3M2 114 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 H7C2Y5 167 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 UPK2O00526 184 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 IGHV3-7P01780 117 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 HSPB1P04792 205 aaKnown RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 MC5RP33032 325 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 TAGLN2P37802 199 aaKnown RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 RAB11AP62491 216 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 PRCDQ00LT1 54 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 AKR1C1Q04828 323 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 ZNF506Q5JVG8 444 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 OR8G2PQ6IF36 304 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 BEND2Q8NDZ0 799 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 OR4C13Q8NGP0 309 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 RAB1CQ92928 201 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 NEIL1Q96FI4 390 aaPredicted RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 RSG1Q9BU20 258 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 SLC35B3Q9H1N7 401 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 TMEM133Q9H2Q1 129 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 RPRMQ9NS64 109 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 SPTBN1Q01082 2364 aaKnown RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 MALRD1Q5VYJ5 2156 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 TET2Q6N021 2002 aaPredicted RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 AGPAT2O15120 278 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 IGFBP2P18065 325 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 USF1P22415 310 aaPredicted RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 GUCA2BQ16661 112 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 TMEM249Q2WGJ8 235 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 KHDC3LQ587J8 217 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 SSX9Q7RTT3 188 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 LY6G5BQ8NDX9 201 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 OR8B3Q8NGG8 313 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 OR10X1Q8NGY0 326 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 ITLN2Q8WWU7 325 aaPredicted RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 RCC1LQ96I51 464 aaKnown RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 OR8B2Q96RD0 313 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 NABP2Q9BQ15 211 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 MRPL20Q9BYC9 149 aaKnown RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 TMEM231Q9H6L2 316 aa9.75□□□□□ -0.85
PKP4-213ENST00000486254 HEYLQ9NQ87 328 aaPredicted RBP9.75□□□□□ -0.85
PKP4-213ENST00000486254 RBFOX3A6NFN3 312 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 C9JQL5 133 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 KBTBD11O94819 623 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 IGLV1-47P01700 117 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 IGKV1-16P04430 117 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 COL8A2P25067 703 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 PAX6P26367 422 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 CD1BP29016 333 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 HOXA1P49639 335 aaPredicted RBP9.74□□□□□ -0.85
PKP4-213ENST00000486254 BTN1A1Q13410 526 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 BSXQ3C1V8 233 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 ATRAIDQ6UW56 229 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 VKORC1L1Q8N0U8 176 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 ZNF709Q8N972 641 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 SLC24A4Q8NFF2 622 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 TMEM167AQ8TBQ9 72 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 NPCDR1Q9BY65 106 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 EIF5A2Q9GZV4 153 aaKnown RBP9.74□□□□□ -0.85
PKP4-213ENST00000486254 MS4A7Q9GZW8 240 aaPredicted RBP9.74□□□□□ -0.85
PKP4-213ENST00000486254 CHODLQ9H9P2 273 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 ENY2Q9NPA8 101 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 WASHC3Q9Y3C0 194 aa9.74□□□□□ -0.85
PKP4-213ENST00000486254 TNCP24821 2201 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 TRAV3A0A0B4J244 114 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 DNASE2O00115 360 aaPredicted RBP9.73□□□□□ -0.85
PKP4-213ENST00000486254 IFNA10P01566 189 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 FGF7P21781 194 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 NPY1RP25929 384 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 LGALS7P47929 136 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 PRRX1P54821 245 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 WDR25Q64LD2 544 aaPredicted RBP9.73□□□□□ -0.85
PKP4-213ENST00000486254 ETV3LQ6ZN32 361 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 ABHD12Q8N2K0 398 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 CLDND2Q8NHS1 167 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms