RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 RHOGP84095 191 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 ZNF45Q02386 682 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 ATP5G2Q06055 141 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 CATR1Q13166 79 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 TATDN3Q17R31 274 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 ZNF818PQ6ZRF7 136 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 CMTM3Q96MX0 182 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 EHFQ9NZC4 300 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 HMX3A6NHT5 357 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 E7EUB6 86 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 SULT1C2O00338 296 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 IGLV1-51P01701 117 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 TRBV12-3P01733 135 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 PRSS3P35030 304 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 RFX2P48378 723 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 SYNJ2BPP57105 145 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 VBP1P61758 197 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 SSX9Q7RTT3 188 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 ANKRD13BQ86YJ7 626 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 NECAP1Q8NC96 275 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 OR9G4Q8NGQ1 327 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 OR4A5Q8NH83 315 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 BORCS5Q969J3 196 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 SLC2A9Q9NRM0 540 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 BET1LQ9NYM9 111 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 COMMD3Q9UBI1 195 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 ZNF257Q9Y2Q1 563 aa14.08□□□□□ -0.16
PRPF40A-209ENST00000486100 SMIM31A0A1B0GVY4 71 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 HPRT1P00492 218 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 ZNF735P0CB33 412 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 GNRHRP30968 328 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 TAS2R31P59538 309 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 HERV-K104P61576 105 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 RPL8P62917 257 aaKnown RBP14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 RPEL1Q2QD12 228 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 IL34Q6ZMJ4 242 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 TMEM17Q86X19 198 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 FYTTD1Q96QD9 318 aaKnown RBP14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 ASCL2Q99929 193 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 RSRP1Q9BUV0 290 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 ADAM30Q9UKF2 790 aa14.07□□□□□ -0.16
PRPF40A-209ENST00000486100 TNCP24821 2201 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 DPPA5A6NC42 116 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 NPIPB5A8MRT5 1133 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 APOA1P02647 267 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 PMP2P02689 132 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 EIF4EP06730 217 aaKnown RBP14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 TAS2R46P59540 309 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 EXOSC2Q13868 293 aaKnown RBP14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 OR4A47Q6IF82 309 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 LYSMD2Q8IV50 215 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 OR5H2Q8NGV7 314 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 CD300LFQ8TDQ1 290 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 MOB3AQ96BX8 217 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 WWC2-AS2Q96NR7 200 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 ZNF2Q9BSG1 426 aaPredicted RBP14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 U3KQK5 164 aa14.06□□□□□ -0.16
PRPF40A-209ENST00000486100 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 A0A1B0GW64 132 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 OR2J3O76001 311 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 CRYGCP07315 174 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 NQO2P16083 231 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 HLA-GP17693 338 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 POU2AF1Q16633 256 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 FAM209BQ5JX69 171 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 AADACL3Q5VUY0 350 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 HAPLN4Q86UW8 402 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 OR51H1Q8NH63 302 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 GPX8Q8TED1 209 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 PLEKHA2Q9HB19 425 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 HRASLSQ9HDD0 168 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 SIGLEC8Q9NYZ4 499 aa14.05□□□□□ -0.16
PRPF40A-209ENST00000486100 BMPR1BO00238 502 aa14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 PGLYRP1O75594 196 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 CSN3P07498 182 aa14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 PSMB6P28072 239 aa14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 RORCP51449 518 aa14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 KLK9Q2XQG4 91 aa14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 C15orf32Q32M92 178 aa14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 OR6F1Q8NGZ6 308 aa14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 FBXL7Q9UJT9 491 aa14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 KLK9Q9UKQ9 250 aa14.04□□□□□ -0.16
PRPF40A-209ENST00000486100 SORL1Q92673 2214 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 H0Y980 276 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 UPK2O00526 184 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 DHFRP00374 187 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 MYOD1P15172 320 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 AREGP15514 252 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 CTRB1P17538 263 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 HLA-DMAP28067 261 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 CTRB2Q6GPI1 263 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 C19orf35Q6ZS72 473 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 FANCD2OSQ96PS1 177 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 SCPEP1Q9HB40 452 aa14.03□□□□□ -0.16
PRPF40A-209ENST00000486100 TRAV3A0A0B4J244 114 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 CGB1A6NKQ9 187 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 S1PR2O95136 353 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 FGF2P09038 288 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 SMIM18P0DKX4 95 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 ELK1P19419 428 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms