RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 IGKV1-39P01597 117 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 IGKV1D-39P04432 117 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 FGF2P09038 288 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 IL3RAP26951 378 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 HTR1DP28221 377 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 THBS3P49746 956 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 BAXQ07812 192 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 KLF17Q5JT82 389 aaPredicted RBP9.14□□□□□ -0.95
SND1-212ENST00000485871 TPTE2P1Q5T6R2 138 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 MINOS1Q5TGZ0 78 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 FAM219AQ8IW50 185 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 DYNAPQ8N1N2 210 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 PIP4P2Q8N4L2 257 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 OR5AN1Q8NGI8 311 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 ADTRPQ96IZ2 230 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 S1PR3Q99500 378 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 TBL2Q9Y4P3 447 aaKnown RBP9.14□□□□□ -0.95
SND1-212ENST00000485871 AMMECR1Q9Y4X0 333 aaPredicted RBP9.14□□□□□ -0.95
SND1-212ENST00000485871 MINOS1-NBL1R4GNA1 71 aa9.14□□□□□ -0.95
SND1-212ENST00000485871 FLNAP21333 2647 aaKnown RBP9.13□□□□□ -0.95
SND1-212ENST00000485871 TRAV40A0A0B4J280 105 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 MSGN1A6NI15 193 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 WRBO00258 174 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 RBFOX2O43251 390 aaKnown RBP eCLIP9.13□□□□□ -0.95
SND1-212ENST00000485871 RAMP3O60896 148 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 REG1BP48304 166 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 VAMP2P63027 116 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 BLOC1S1P78537 153 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 HABP2Q14520 560 aaPredicted RBP9.13□□□□□ -0.95
SND1-212ENST00000485871 CYB5R2Q6BCY4 276 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 FOXRED2Q8IWF2 684 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 STPG2Q8N412 459 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 C17orf50Q8WW18 174 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 TCTEX1D2Q8WW35 142 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 CXorf58Q96LI9 332 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 C7orf69Q9H7B7 122 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 DPM3Q9P2X0 92 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 NUP50Q9UKX7 468 aa9.13□□□□□ -0.95
SND1-212ENST00000485871 RCL1Q9Y2P8 373 aaKnown RBP9.13□□□□□ -0.95
SND1-212ENST00000485871 VPS13CQ709C8 3753 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 IGHV1-69DA0A0B4J2H0 117 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 IGHV1-3A0A0C4DH29 117 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 A0A1W2PRD5 423 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 A0A1W2PRF3 423 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 A0A1W2PRM7 423 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 FAM90A26D6RGX4 464 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 H0YJW9 148 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 NPFFO15130 113 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 IGHV1-69P01742 117 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 SEC11BP0C7V7 166 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 IGHV4-38-2P0DP08 117 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 SAA4P35542 130 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 RAB5CP51148 216 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 ID3Q02535 119 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 ZNF266Q14584 549 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 MIDNQ504T8 468 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 RUSC1-AS1Q66K80 236 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 IL34Q6ZMJ4 242 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 TGIF2LXQ8IUE1 241 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 SPAG16Q8N0X2 631 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 OR2C3Q8N628 320 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 RNASE11Q8TAA1 199 aaKnown RBP9.12□□□□□ -0.95
SND1-212ENST00000485871 CD300LFQ8TDQ1 290 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 CFHR4Q92496 578 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 MARC2Q969Z3 335 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 RBMXL1Q96E39 390 aaKnown RBP9.12□□□□□ -0.95
SND1-212ENST00000485871 RAB40CQ96S21 281 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 ARV1Q9H2C2 271 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 COA4Q9NYJ1 87 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 FBXL17Q9UF56 701 aa9.12□□□□□ -0.95
SND1-212ENST00000485871 TET2Q6N021 2002 aaPredicted RBP9.11□□□□□ -0.95
SND1-212ENST00000485871 A0A0G2JRQ6 117 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 OOSP1A8MZH6 123 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 SMAD7O15105 426 aaKnown RBP9.11□□□□□ -0.95
SND1-212ENST00000485871 TXNL1O43396 289 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 PITX3O75364 302 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 SCAF4O95104 1147 aaKnown RBP9.11□□□□□ -0.95
SND1-212ENST00000485871 S1PR2O95136 353 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 LY86O95711 162 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 P0C879 139 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 KIR2DS2P43631 304 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 LPAR6P43657 344 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 SULT1A2P50226 295 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 ARHGDIBP52566 201 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 TAS2R30P59541 319 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 RPL23AP62750 156 aaKnown RBP9.11□□□□□ -0.95
SND1-212ENST00000485871 OR2B11Q5JQS5 317 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 DMBX1Q8NFW5 382 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 RPEQ96AT9 228 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 C11orf1Q9H5F2 150 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 SLC35D1Q9NTN3 355 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 LYRM2Q9NU23 88 aaPredicted RBP9.11□□□□□ -0.95
SND1-212ENST00000485871 CACFD1Q9UGQ2 172 aa9.11□□□□□ -0.95
SND1-212ENST00000485871 FN1P02751 2386 aaKnown RBP9.1□□□□□ -0.95
SND1-212ENST00000485871 FAM90A9PA6NNJ1 464 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 CD5LO43866 347 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 FCGR3BO75015 233 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 MED6O75586 246 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 LY6G6DO95868 133 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 HPRT1P00492 218 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms