RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PHB2Q99623 299 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 PLEKHA2Q9HB19 425 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 HRASLSQ9HDD0 168 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 PTTG2Q9NZH5 202 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 COMMD9Q9P000 198 aa9.29□□□□□ -0.92
HPS4-214ENST00000485842 C14orf166Q9Y224 244 aaKnown RBP9.29□□□□□ -0.92
HPS4-214ENST00000485842 TSSC4Q9Y5U2 329 aaPredicted RBP9.29□□□□□ -0.92
HPS4-214ENST00000485842 LINC00854A0A1B0GVQ3 168 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 ADARB2-AS1A8MUL3 147 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 NUDT19A8MXV4 375 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 MPPED1O15442 326 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 RPLP1P05386 114 aaKnown RBP9.28□□□□□ -0.92
HPS4-214ENST00000485842 APELAP0DMC3 54 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 PF4V1P10720 104 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
HPS4-214ENST00000485842 ECI1P42126 302 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 CRIP2P52943 208 aaPredicted RBP9.28□□□□□ -0.92
HPS4-214ENST00000485842 ZNF45Q02386 682 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 TMEM267Q0VDI3 215 aaPredicted RBP9.28□□□□□ -0.92
HPS4-214ENST00000485842 FOXE3Q13461 319 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 SURF2Q15527 256 aaPredicted RBP9.28□□□□□ -0.92
HPS4-214ENST00000485842 ZNF585BQ52M93 769 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 C10orf55Q5SWW7 151 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 FAM110DQ8TAY7 271 aaPredicted RBP9.28□□□□□ -0.92
HPS4-214ENST00000485842 TMEM167AQ8TBQ9 72 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 SRSF12Q8WXF0 261 aaKnown RBP9.28□□□□□ -0.92
HPS4-214ENST00000485842 SDHCQ99643 169 aaPredicted RBP9.28□□□□□ -0.92
HPS4-214ENST00000485842 AIFM2Q9BRQ8 373 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 TMEM140Q9NV12 185 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 SLC2A8Q9NY64 477 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 FOXA2Q9Y261 457 aaPredicted RBP9.28□□□□□ -0.92
HPS4-214ENST00000485842 NUBP2Q9Y5Y2 271 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 TNCP24821 2201 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 DNHD1Q96M86 4753 aa9.28□□□□□ -0.92
HPS4-214ENST00000485842 MARCH11A6NNE9 402 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 H0Y980 276 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 KRASP01116 189 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 IGHG4P01861 327 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 SERPINE2P07093 398 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 ELANEP08246 267 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 PPIFP30405 207 aaKnown RBP9.27□□□□□ -0.93
HPS4-214ENST00000485842 G6PCP35575 357 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 RPL23AP62750 156 aaKnown RBP9.27□□□□□ -0.93
HPS4-214ENST00000485842 RPL8P62917 257 aaKnown RBP9.27□□□□□ -0.93
HPS4-214ENST00000485842 C19orf54Q5BKX5 351 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 TMEM65Q6PI78 240 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 CASTOR1Q8WTX7 329 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 C5orf66Q9H5L9 145 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 AKIP1Q9NQ31 210 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 BET1LQ9NYM9 111 aa9.27□□□□□ -0.93
HPS4-214ENST00000485842 TRAV3A0A0B4J244 114 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 TEX13DA0A0J9YY54 714 aaPredicted RBP9.26□□□□□ -0.93
HPS4-214ENST00000485842 C3orf85A0A1B0GTC6 90 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 MSGN1A6NI15 193 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 SOX15O60248 233 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 IL7P13232 177 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 MYOD1P15172 320 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 RPL27AP46776 148 aaKnown RBP9.26□□□□□ -0.93
HPS4-214ENST00000485842 POU2AF1Q16633 256 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 TRIM16LQ309B1 348 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 SP6Q3SY56 376 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 AKIRIN2Q53H80 203 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 PRR31Q5SQ13 230 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 C18orf65Q6ZTR6 163 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 MINDY2Q8NBR6 621 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 OR5T1Q8NG75 326 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 OR4A5Q8NH83 315 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 SCGB3A2Q96PL1 93 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 FYTTD1Q96QD9 318 aaKnown RBP9.26□□□□□ -0.93
HPS4-214ENST00000485842 TP53RKQ96S44 253 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 RTBDNQ9BSG5 229 aaPredicted RBP9.26□□□□□ -0.93
HPS4-214ENST00000485842 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 FAM212BQ9NTI7 297 aaPredicted RBP9.26□□□□□ -0.93
HPS4-214ENST00000485842 GPR132Q9UNW8 380 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 VSIG4Q9Y279 399 aa9.26□□□□□ -0.93
HPS4-214ENST00000485842 UPK2O00526 184 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 IGLV1-40P01703 118 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 OR5AC1P0C628 307 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 HLA-GP17693 338 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 PSMB8P28062 276 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 MAS1LP35410 378 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 ASPHD1Q5U4P2 390 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 TREML4Q6UXN2 200 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 C8orf86Q6ZUL3 223 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 ADAD2Q8NCV1 583 aaKnown RBP9.25□□□□□ -0.93
HPS4-214ENST00000485842 OR4F17Q8NGA8 305 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 OR5M8Q8NGP6 311 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 DEDD2Q8WXF8 326 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 MS4A10Q96PG2 267 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 OR4F4Q96R69 305 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 SPIN2AQ99865 258 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 SPIN2BQ9BPZ2 258 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 NAA60Q9H7X0 242 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 ZNF355PQ9NSJ1 428 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 COA4Q9NYJ1 87 aa9.25□□□□□ -0.93
HPS4-214ENST00000485842 WNK1Q9H4A3 2382 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 NAP1L6A6NFF2 107 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 HMX3A6NHT5 357 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 CRYM-AS1A6NIL9 109 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms