RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 EDA2RQ9HAV5 297 aa13.01□□□□□ -0.33
SMC4-216ENST00000485645 ZNF257Q9Y2Q1 563 aa13.01□□□□□ -0.33
SMC4-216ENST00000485645 DPPA5A6NC42 116 aa13□□□□□ -0.33
SMC4-216ENST00000485645 HMX3A6NHT5 357 aa13□□□□□ -0.33
SMC4-216ENST00000485645 SSX5O60225 188 aa13□□□□□ -0.33
SMC4-216ENST00000485645 KBTBD11O94819 623 aa13□□□□□ -0.33
SMC4-216ENST00000485645 IFNA6P05013 189 aa13□□□□□ -0.33
SMC4-216ENST00000485645 SCAND1P57086 179 aa13□□□□□ -0.33
SMC4-216ENST00000485645 C15orf32Q32M92 178 aa13□□□□□ -0.33
SMC4-216ENST00000485645 MFSD4AQ8N468 514 aa13□□□□□ -0.33
SMC4-216ENST00000485645 LGALS14Q8TCE9 139 aa13□□□□□ -0.33
SMC4-216ENST00000485645 RHBDL2Q9NX52 303 aa13□□□□□ -0.33
SMC4-216ENST00000485645 TEX22C9J3V5 150 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 MAS1LP35410 378 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 RPL27AP46776 148 aaKnown RBP12.99□□□□□ -0.33
SMC4-216ENST00000485645 ARPC4P59998 168 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 EIF4EBP1Q13541 118 aaPredicted RBP12.99□□□□□ -0.33
SMC4-216ENST00000485645 IDNKQ5T6J7 187 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 ZNF66Q6ZN08 573 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 PUSL1Q8N0Z8 303 aaKnown RBP12.99□□□□□ -0.33
SMC4-216ENST00000485645 TMEM167AQ8TBQ9 72 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 DYNLRB2Q8TF09 96 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 FYTTD1Q96QD9 318 aaKnown RBP12.99□□□□□ -0.33
SMC4-216ENST00000485645 LYSTQ99698 3801 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 TAS2R8Q9NYW2 309 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 ETV7Q9Y603 341 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 CSMD3Q7Z407 3707 aa12.99□□□□□ -0.33
SMC4-216ENST00000485645 NPIPB5A8MRT5 1133 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 PPP5D1E7EU14 171 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 TMEM127O75204 238 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 GGCTO75223 188 aaKnown RBP12.98□□□□□ -0.33
SMC4-216ENST00000485645 IL6RP08887 468 aaPredicted RBP12.98□□□□□ -0.33
SMC4-216ENST00000485645 CD81P60033 236 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
SMC4-216ENST00000485645 ADAMTSL5Q6ZMM2 481 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 LAX1Q8IWV1 398 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 BEST4Q8NFU0 473 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 SLC2A9Q9NRM0 540 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 SLC2A8Q9NY64 477 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 FBXL7Q9UJT9 491 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 STARD9Q9P2P6 4700 aa12.98□□□□□ -0.33
SMC4-216ENST00000485645 E7EUB6 86 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 TPPPO94811 219 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 HRASP01112 189 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 ZNF735P0CB33 412 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 TGFBR1P36897 503 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 KIR2DS2P43631 304 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 BRWD1-AS2P59051 145 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 C19orf35Q6ZS72 473 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 SSX9Q7RTT3 188 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 CROCCP3Q8IVE0 287 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 SECTM1Q8WVN6 248 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 NEURL2Q9BR09 285 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 PLEKHA3Q9HB20 300 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 DMRT1Q9Y5R6 373 aa12.97□□□□□ -0.33
SMC4-216ENST00000485645 TRAV18A0A075B6X5 111 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 C2orf70A6NJV1 201 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 ZNF785A8K8V0 405 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 TNFSF12O43508 249 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 OR2C1O95371 312 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 DHFRP00374 187 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 HLA-AP01891 365 aaKnown RBP12.96□□□□□ -0.33
SMC4-216ENST00000485645 SMIM18P0DKX4 95 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 FCGR2CP31995 323 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 LSM3P62310 102 aaKnown RBP12.96□□□□□ -0.33
SMC4-216ENST00000485645 RPL8P62917 257 aaKnown RBP12.96□□□□□ -0.33
SMC4-216ENST00000485645 MSMO1Q15800 293 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 DEFB114Q30KQ6 69 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 GVQW1Q8N7I0 195 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 OR13F1Q8NGS4 319 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 OR5H6Q8NGV6 325 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 GPHA2Q96T91 129 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 AIFM2Q9BRQ8 373 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 FUNDC2Q9BWH2 189 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 CCL28Q9NRJ3 127 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 GAR1Q9NY12 217 aaKnown RBP12.96□□□□□ -0.33
SMC4-216ENST00000485645 CEPT1Q9Y6K0 416 aa12.96□□□□□ -0.33
SMC4-216ENST00000485645 LCE6AA0A183 80 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 A0A1B0GW64 132 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 LGALS9O00182 355 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 NDUFB8O95169 186 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 CRYGCP07315 174 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 CD7P09564 240 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 FOLR2P14207 255 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 PSMB6P28072 239 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 RPS19P39019 145 aaKnown RBP12.95□□□□□ -0.34
SMC4-216ENST00000485645 LINC00322Q6ZN03 302 aaPredicted RBP12.95□□□□□ -0.34
SMC4-216ENST00000485645 HOGA1Q86XE5 327 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 GPHB5Q86YW7 130 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 ZBTB34Q8NCN2 500 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 SLC25A38Q96DW6 304 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 FANCD2OSQ96PS1 177 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 TECRQ9NZ01 308 aaKnown RBP12.95□□□□□ -0.34
SMC4-216ENST00000485645 DNAH1Q9P2D7 4330 aa12.95□□□□□ -0.34
SMC4-216ENST00000485645 A0A0A6YYH2 397 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 A6NJ64 397 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 PPYP01298 95 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 IGHV3-23P01764 117 aa12.94□□□□□ -0.34
SMC4-216ENST00000485645 PTHLHP12272 177 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms