RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 GABARAPO95166 117 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 FCGR3AP08637 254 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 GSTT2P0CG29 244 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 GSTT2BP0CG30 244 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 DUTP33316 252 aaKnown RBP10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 RPS19P39019 145 aaKnown RBP10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 CDK10Q15131 360 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 CTF1Q16619 201 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 MMD2Q8IY49 270 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 TTC9CQ8N5M4 171 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 OR10R2Q8NGX6 335 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 DDB2Q92466 427 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 DCUN1D5Q9BTE7 237 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 ZNF430Q9H8G1 570 aaPredicted RBP10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 PLECQ15149 4684 aaKnown RBP10.33□□□□□ -0.76
SMARCD3-211ENST00000485592 CXorf65A6NEN9 183 aa10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 NUPR2A6NF83 97 aa10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 SAA1P0DJI8 122 aaPredicted RBP10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 HIST1H1DP16402 221 aaKnown RBP10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 EDN2P20800 178 aa10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 PMS2P11Q13670 270 aa10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 ZNF57Q68EA5 555 aaPredicted RBP10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 OR52B4Q8NGK2 314 aa10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 RAB3CQ96E17 227 aa10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 ST6GALNAC5Q9BVH7 336 aa10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 ELF5Q9UKW6 265 aaPredicted RBP10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 ZNF257Q9Y2Q1 563 aa10.32□□□□□ -0.76
SMARCD3-211ENST00000485592 LOC102724200A0A096LPH7 203 aaPredicted RBP10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 DPPA5A6NC42 116 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 LINC00473A8K010 186 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 OR2C1O95371 312 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 HLA-AP01891 365 aaKnown RBP10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 GNB3P16520 340 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 CBLN1P23435 193 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 ARL3P36405 182 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 SCAND1P57086 179 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 VBP1P61758 197 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 ANKRD55Q3KP44 614 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 C10orf55Q5SWW7 151 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 IDNKQ5T6J7 187 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 GPHB5Q86YW7 130 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 MAFIPQ8WZ33 124 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 RHBDL2Q9NX52 303 aa10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 MRPS7Q9Y2R9 242 aaKnown RBP10.31□□□□□ -0.76
SMARCD3-211ENST00000485592 FCGR3BO75015 233 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 NDUFB8O95169 186 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 FAM106AQ4KMX7 169 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 TMEM61Q8N0U2 210 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 CACNG8Q8WXS5 425 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 SLC25A46Q96AG3 418 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 OVOL2Q9BRP0 275 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 FBXL7Q9UJT9 491 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 PRELID3BQ9Y3B1 194 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 ETV7Q9Y603 341 aa10.3□□□□□ -0.76
SMARCD3-211ENST00000485592 A0A075B6Q4 140 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 ZNF320A2RRD8 509 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 HMX3A6NHT5 357 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 NPIPB5A8MRT5 1133 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 DHFRP00374 187 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 TALDO1P37837 337 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 GPR107Q5VW38 600 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 OR4A47Q6IF82 309 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 CLEC19AQ6UXS0 136 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 KCTD9Q7L273 389 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 H1FOOQ8IZA3 346 aaPredicted RBP10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 ZNF645Q8N7E2 425 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 VSTM2AQ8TAG5 236 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 EEF1AKMT3Q96AZ1 226 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 ATG5Q9H1Y0 275 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 SPATA2Q9UM82 520 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 DMRT1Q9Y5R6 373 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 SELENOKQ9Y6D0 94 aa10.29□□□□□ -0.76
SMARCD3-211ENST00000485592 IGKV1D-8A0A087WSZ0 117 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 A0A0J9YWU9 116 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 TMEM213A2RRL7 107 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 METTL21EPA6NDL7 271 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 A8MWP6 167 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 TMEM127O75204 238 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 SCAF4O95104 1147 aaKnown RBP10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 IGHV3-23P01764 117 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 RPL27AP46776 148 aaKnown RBP10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 ARFRP1Q13795 201 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 UXS1Q8NBZ7 420 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 CCDC140Q96MF4 163 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 FYTTD1Q96QD9 318 aaKnown RBP10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 MLXQ9UH92 298 aa10.28□□□□□ -0.76
SMARCD3-211ENST00000485592 TMEM235A6NFC5 223 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 TEX22C9J3V5 150 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 J3QRK9 145 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 SSX5O60225 188 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 SLC22A5O76082 557 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 KBTBD11O94819 623 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 MAS1LP35410 378 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 APOC4P55056 127 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 TM4SF20Q53R12 229 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 OR2B11Q5JQS5 317 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 BTNL8Q6UX41 500 aa10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 RBPMS2Q6ZRY4 209 aaKnown RBP10.27□□□□□ -0.77
SMARCD3-211ENST00000485592 Q6ZS49 121 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms