RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 BMPR1BO00238 502 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 TUSC2O75896 110 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 NFYAP23511 347 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ZNF45Q02386 682 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 CDK10Q15131 360 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 CDNFQ49AH0 187 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 MMD2Q8IY49 270 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 NUDCD2Q8WVJ2 157 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 THAP7Q9BT49 309 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 SIGLEC8Q9NYZ4 499 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 PRELID3BQ9Y3B1 194 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 OR2W1Q9Y3N9 320 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 CEPT1Q9Y6K0 416 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 CROCCP3Q8IVE0 287 aa11.59□□□□□ -0.55
HLA-DQB1-208ENST00000484729 LGALS14Q8TCE9 139 aa11.59□□□□□ -0.55
HLA-DQB1-208ENST00000484729 DYNLRB2Q8TF09 96 aa11.59□□□□□ -0.55
HLA-DQB1-208ENST00000484729 RBMX2Q9Y388 322 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB1-208ENST00000484729 TMEM235A6NFC5 223 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 OR2J3O76001 311 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 CTXN2P0C2S0 81 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 RPS19P39019 145 aaKnown RBP11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 GNG2P59768 71 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 CD81P60033 236 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 RPL30P62888 115 aaKnown RBP11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 CTF1Q16619 201 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 HACD4Q5VWC8 232 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 VKORC1L1Q8N0U8 176 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 NECAP1Q8NC96 275 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 OR2K2Q8NGT1 345 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 RAB2BQ8WUD1 216 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 TCTEX1D2Q8WW35 142 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 PLEKHA3Q9HB20 300 aa11.58□□□□□ -0.56
HLA-DQB1-208ENST00000484729 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 TRBV9A0A0B4J1U6 114 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 IGKV1D-13A0A0B4J2D9 117 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 DPPA5A6NC42 116 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 CCDC160A6NGH7 325 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 HMX3A6NHT5 357 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SLC22A5O76082 557 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 HLA-DQB1P01920 261 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 IGKV1-13P0DP09 117 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 C15orf32Q32M92 178 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 CD300EQ496F6 205 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SLC25A42Q86VD7 318 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 TTC9CQ8N5M4 171 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 OR4S2Q8NH73 311 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SLC25A46Q96AG3 418 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 DCSTAMPQ9H295 470 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SPATA2Q9UM82 520 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 ETV7Q9Y603 341 aa11.57□□□□□ -0.56
HLA-DQB1-208ENST00000484729 PPP5D1E7EU14 171 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SCGNO76038 276 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 TPPPO94811 219 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 RPL27AP46776 148 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 TMBIM6P55061 237 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 CNIH2Q6PI25 160 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 VSTM2AQ8TAG5 236 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 FYTTD1Q96QD9 318 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 HSD17B10Q99714 261 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 BCL7BQ9BQE9 202 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 NEURL2Q9BR09 285 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SLC2A8Q9NY64 477 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 TAS2R8Q9NYW2 309 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 ZNF257Q9Y2Q1 563 aa11.56□□□□□ -0.56
HLA-DQB1-208ENST00000484729 TEX22C9J3V5 150 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 TMEM127O75204 238 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 KBTBD11O94819 623 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 IGLV2-14P01704 120 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 HLA-AP01891 365 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 MECP2P51608 486 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SCAND1P57086 179 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 GUCA2BQ16661 112 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 FAM209BQ5JX69 171 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 LAX1Q8IWV1 398 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 RPP25LQ8N5L8 163 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 KCTD12Q96CX2 325 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 RHBDL2Q9NX52 303 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 ANXA10Q9UJ72 324 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 FBXL7Q9UJT9 491 aa11.55□□□□□ -0.56
HLA-DQB1-208ENST00000484729 NPIPB5A8MRT5 1133 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SSX5O60225 188 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 GGCTO75223 188 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 IGHV3-23P01764 117 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 CD7P09564 240 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 EDN2P20800 178 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 RORCP51449 518 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SPCS2Q15005 226 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 SSX9Q7RTT3 188 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 PUSL1Q8N0Z8 303 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 OR5H6Q8NGV6 325 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 TMEM167AQ8TBQ9 72 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 GPHA2Q96T91 129 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 WFDC10AQ9H1F0 79 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 S4R3C0 116 aa11.54□□□□□ -0.56
HLA-DQB1-208ENST00000484729 C2orf70A6NJV1 201 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 H3BMQ9 156 aa11.53□□□□□ -0.56
HLA-DQB1-208ENST00000484729 OR2C1O95371 312 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms