RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	SURF2	Q15527	256 aa	Predicted RBP	11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	CMTM1	Q8IZ96	169 aa		11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	ADAD2	Q8NCV1	583 aa	Known RBP	11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	ZFAND1	Q8TCF1	268 aa		11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	TMEM230	Q96A57	120 aa		11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	ZNF486	Q96H40	463 aa	Predicted RBP	11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	HARBI1	Q96MB7	349 aa		11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	LIN7C	Q9NUP9	197 aa	Known RBP	11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	SCP2D1	Q9UJQ7	156 aa		11.74	□□□□□ -0.53
NR1H3-222	ENST00000483882	SHOX	O15266	292 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	SLC25A17	O43808	307 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	PRAF2	O60831	178 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	CCNK	O75909	580 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	NDUFB6	O95139	128 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	IGKV1-39	P01597	117 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	IGKV1D-39	P04432	117 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	PF4V1	P10720	104 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	CD33	P20138	364 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	LGALS7	P47929	136 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	CD300C	Q08708	224 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	RBMS2	Q15434	407 aa	Known RBP	11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	VKORC1L1	Q8N0U8	176 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	OR5AU1	Q8NGC0	362 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	OR4S2	Q8NH73	311 aa		11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	OSR1	Q8TAX0	266 aa	Predicted RBP	11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	TSNAX	Q99598	290 aa	Known RBP	11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	METTL1	Q9UBP6	276 aa	Known RBP	11.73	□□□□□ -0.53
NR1H3-222	ENST00000483882	S1PR2	O95136	353 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	SPDEF	O95238	335 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	IGHG2	P01859	326 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	HLA-DRB1	P01911	266 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	IGLL1	P15814	213 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	ECI1	P42126	302 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	KIR2DS2	P43631	304 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	LPAR6	P43657	344 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	MECP2	P51608	486 aa	Known RBP	11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	RAB25	P57735	213 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	UBE2K	P61086	200 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	NDP	Q00604	133 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	PJVK	Q0ZLH3	352 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	C9orf152	Q5JTZ5	239 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	TP53RK	Q96S44	253 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	RASL11B	Q9BPW5	248 aa		11.72	□□□□□ -0.53
NR1H3-222	ENST00000483882	IGHV7-81	A0A0B4J1V7	117 aa		11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	ARPC1B	O15143	372 aa	Known RBP	11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	IL6R	P08887	468 aa	Predicted RBP	11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	SAA1	P0DJI8	122 aa	Predicted RBP	11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	RRAS2	P62070	204 aa	Predicted RBP	11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	POU2AF1	Q16633	256 aa		11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	SP6	Q3SY56	376 aa		11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	LIN54	Q6MZP7	749 aa		11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	PUSL1	Q8N0Z8	303 aa	Known RBP	11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	TEX45	Q8NA69	505 aa		11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	CLCC1	Q96S66	551 aa		11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	PLEKHA2	Q9HB19	425 aa		11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	FBXO7	Q9Y3I1	522 aa		11.71	□□□□□ -0.53
NR1H3-222	ENST00000483882	TCRBV4S1A1T	A0A5B7	111 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	CRYM-AS1	A6NIL9	109 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	HPRT1	P00492	218 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	PF4	P02776	101 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	IL5	P05113	134 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	EGR2	P11161	476 aa	Predicted RBP	11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	SUPT4H1	P63272	117 aa	Known RBP	11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	CX3CL1	P78423	397 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	CD83	Q01151	205 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	CBX3	Q13185	183 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	C10orf99	Q6UWK7	81 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	SLC35E3	Q7Z769	313 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	CD300LF	Q8TDQ1	290 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	ST6GAL2	Q96JF0	529 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	RHOV	Q96L33	236 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	NOL4L	Q96MY1	436 aa	Predicted RBP	11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	OR51J1	Q9H342	316 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	NAA60	Q9H7X0	242 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	KIAA1456	Q9P272	454 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	LINC00527	Q9UJ94	153 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	FLVCR2	Q9UPI3	526 aa		11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	C14orf166	Q9Y224	244 aa	Known RBP	11.7	□□□□□ -0.54
NR1H3-222	ENST00000483882	TRAV3	A0A0B4J244	114 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	C3orf85	A0A1B0GTC6	90 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882		H0Y980	276 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	CA2	P00918	260 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	RPA2	P15927	270 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	EIF2B2	P49770	351 aa	Known RBP	11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	PRSS8	Q16651	343 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	KHDC1L	Q5JSQ8	128 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	SSX9	Q7RTT3	188 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	PPP1R27	Q86WC6	154 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	TCTEX1D1	Q8N7M0	179 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	CCDC71L	Q8N9Z2	235 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	GLYATL2	Q8WU03	294 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	MED28	Q9H204	178 aa		11.69	□□□□□ -0.54
NR1H3-222	ENST00000483882	OR5AC1	P0C628	307 aa		11.68	□□□□□ -0.54
NR1H3-222	ENST00000483882	UCP1	P25874	307 aa		11.68	□□□□□ -0.54
NR1H3-222	ENST00000483882	S100G	P29377	79 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms