RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 OR13D1Q8NGV5 346 aa21.34■■□□□ 1.01
SHOX2-204ENST00000483851 ONECUT1Q9UBC0 465 aa21.34■■□□□ 1.01
SHOX2-204ENST00000483851 FLNCQ14315 2725 aa21.33■■□□□ 1.01
SHOX2-204ENST00000483851 C9JQL5 133 aa21.33■■□□□ 1.01
SHOX2-204ENST00000483851 NUPL2O15504 423 aaKnown RBP21.33■■□□□ 1.01
SHOX2-204ENST00000483851 SPCS3P61009 180 aa21.33■■□□□ 1.01
SHOX2-204ENST00000483851 RELBQ01201 579 aa21.33■■□□□ 1.01
SHOX2-204ENST00000483851 ZNF525Q8N782 197 aa21.33■■□□□ 1.01
SHOX2-204ENST00000483851 IL6RP08887 468 aaPredicted RBP21.32■■□□□ 1
SHOX2-204ENST00000483851 COX6B1P14854 86 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 SNCAP37840 140 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 RAB13P51153 203 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 DYNLT3P51808 116 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 CLINT1Q14677 625 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 TMEM177Q53S58 311 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 OR5C1Q8NGR4 320 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 TRIM77I1YAP6 450 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 SCAF4O95104 1147 aaKnown RBP21.32■■□□□ 1
SHOX2-204ENST00000483851 IAPPP10997 89 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 FHITP49789 147 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 OR4A47Q6IF82 309 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 SSX9Q7RTT3 188 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 Q8N7P7 452 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 DTD1Q8TEA8 209 aa21.32■■□□□ 1
SHOX2-204ENST00000483851 NDUFS8O00217 210 aa21.31■■□□□ 1
SHOX2-204ENST00000483851 ENSAO43768 121 aaKnown RBP21.31■■□□□ 1
SHOX2-204ENST00000483851 ATP6V0CP27449 155 aa21.31■■□□□ 1
SHOX2-204ENST00000483851 UNKLQ9H9P5 680 aaKnown RBP21.31■■□□□ 1
SHOX2-204ENST00000483851 BUB1B-PAK6H3BSN5 160 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 AGPAT2O15120 278 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 DFFBO76075 338 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 CST7O76096 145 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 TSPAN15O95858 294 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 PRTN3P24158 256 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 CAMLGP49069 296 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 OR11H6Q8NGC7 330 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 OR4C13Q8NGP0 309 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 LHX4Q969G2 390 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 QTRT1Q9BXR0 403 aaKnown RBP21.3■■□□□ 1
SHOX2-204ENST00000483851 FOXA2Q9Y261 457 aaPredicted RBP21.3■■□□□ 1
SHOX2-204ENST00000483851 WASHC3Q9Y3C0 194 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 UBR5O95071 2799 aaPredicted RBP21.3■■□□□ 1
SHOX2-204ENST00000483851 C15orf61A6NNL5 157 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 IGKV1-16P04430 117 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 SFTA3P0C7M3 94 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 HBG1P69891 147 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 HBG2P69892 147 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 SP5Q6BEB4 398 aaPredicted RBP21.3■■□□□ 1
SHOX2-204ENST00000483851 TMEM14EPQ6UXP3 125 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 VKORC1L1Q8N0U8 176 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 FLYWCH2Q96CP2 140 aaKnown RBP21.3■■□□□ 1
SHOX2-204ENST00000483851 BPESC1Q9GZL8 116 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 BET1LQ9NYM9 111 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 KPTNQ9Y664 436 aa21.3■■□□□ 1
SHOX2-204ENST00000483851 SPTAN1Q13813 2472 aaKnown RBP21.29■■□□□ 1
SHOX2-204ENST00000483851 PRNDQ9UKY0 176 aa21.29■■□□□ 1
SHOX2-204ENST00000483851 CEBPZOSA8MTT3 80 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 H3BP45 60 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 H7C2Y5 167 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 LMO4P61968 165 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 TMEM182Q6ZP80 229 aaPredicted RBP21.28■■□□□ 1
SHOX2-204ENST00000483851 TMEM14BQ9NUH8 114 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 UMAD1C9J7I0 102 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 IFNA17P01571 189 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 ARF6P62330 175 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 ZNF616Q08AN1 781 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 SPANXN5Q5MJ07 72 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 OR4P4Q8NGL7 312 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 CLCC1Q96S66 551 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 ATP5SQ99766 215 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 ZNF257Q9Y2Q1 563 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 RFNGQ9Y644 331 aa21.28■■□□□ 1
SHOX2-204ENST00000483851 SNAPINO95295 136 aa21.27■■□□□ 1
SHOX2-204ENST00000483851 PAX1P15863 534 aa21.27■■□□□ 1
SHOX2-204ENST00000483851 REG1BP48304 166 aa21.27■■□□□ 1
SHOX2-204ENST00000483851 OR2B8PP59922 312 aa21.27■■□□□ 1
SHOX2-204ENST00000483851 OR2G3Q8NGZ4 309 aa21.27■■□□□ 1
SHOX2-204ENST00000483851 CLDND2Q8NHS1 167 aa21.27■■□□□ 1
SHOX2-204ENST00000483851 VSTM2AQ8TAG5 236 aa21.27■■□□□ 1
SHOX2-204ENST00000483851 FKBP11Q9NYL4 201 aa21.27■■□□□ 1
SHOX2-204ENST00000483851 UPK2O00526 184 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 H2AFB1P0C5Y9 115 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 RPP30P78346 268 aaKnown RBP21.26■□□□□ 0.99
SHOX2-204ENST00000483851 DIAPH2-AS1Q14236 149 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 TMEM217Q8N7C4 229 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 OR4A5Q8NH83 315 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 GNPNAT1Q96EK6 184 aaPredicted RBP21.26■□□□□ 0.99
SHOX2-204ENST00000483851 HARBI1Q96MB7 349 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 PIMREGQ9BSJ6 248 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 A0A1B0GW64 132 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 PRH1P02810 166 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 ATF4P18848 351 aaPredicted RBP21.26■□□□□ 0.99
SHOX2-204ENST00000483851 NPBWR1P48145 328 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 HSPE1P61604 102 aaKnown RBP21.26■□□□□ 0.99
SHOX2-204ENST00000483851 PAX2Q02962 417 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 PNKDQ8N490 385 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 FAM168AQ92567 244 aa21.26■□□□□ 0.99
SHOX2-204ENST00000483851 TRAV3A0A0B4J244 114 aa21.25■□□□□ 0.99
SHOX2-204ENST00000483851 LY6LH3BQJ8 138 aa21.25■□□□□ 0.99
SHOX2-204ENST00000483851 FOXH1O75593 365 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms