RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 FAM223BA6NKX1 122 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 ZFP92A6NM28 416 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 EFCAB9A8MZ26 197 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 M0QX08 132 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 FCN1O00602 326 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 SDHDO14521 159 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 DYNC1I1O14576 645 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 SH2D1BO14796 132 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 LANCL1O43813 399 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 ZNF861PO60384 105 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 PLIN3O60664 434 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 TXNDC12O95881 172 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 NRASP01111 189 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 RLN1P04808 185 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 IL6P05231 212 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 HTN3P15516 51 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 GALP22466 123 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 GNRHRP30968 328 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 CDKN1BP46527 198 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 PRKCDQ05655 676 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 ATP5G2Q06055 141 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 EXOSC2Q13868 293 aaKnown RBP1.87□□□□□ -2.11
RPA3-207ENST00000483031 SCARB2Q14108 478 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 CLINT1Q14677 625 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 MEF2DQ14814 521 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 PLGLAQ15195 96 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 LTC4SQ16873 150 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 CNPY1Q3B7I2 92 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 ACOT6Q3I5F7 207 aaPredicted RBP1.87□□□□□ -2.11
RPA3-207ENST00000483031 CCDC153Q494R4 210 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 ZBED5Q49AG3 693 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 TMEM69Q5SWH9 247 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 METTL21CQ5VZV1 264 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 TRAT1Q6PIZ9 186 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 ZNF773Q6PK81 442 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 DPY19L2P2Q6ZN68 376 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 SLC25A48Q6ZT89 311 aaKnown RBP1.87□□□□□ -2.11
RPA3-207ENST00000483031 MSANTD1Q6ZTZ1 278 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 TMEM179BQ7Z7N9 219 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 FAM223AQ8IWN6 122 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 MICU2Q8IYU8 434 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 CEND1Q8N111 149 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 CHST4Q8NCG5 386 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 OR4D11Q8NGI4 311 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 OR52M1Q8NGK5 317 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 VN1R17PQ8TDU5 208 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 ACMSDQ8TDX5 336 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 LZICQ8WZA0 190 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 GHSRQ92847 366 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 COQ2Q96H96 371 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 RAB40CQ96S21 281 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 GPX7Q96SL4 187 aaPredicted RBP1.87□□□□□ -2.11
RPA3-207ENST00000483031 SORT1Q99523 831 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 NIPSNAP3BQ9BS92 247 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 CHST5Q9GZS9 411 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 FBXL15Q9H469 300 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 DPH3P1Q9H4G8 78 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 CYTL1Q9NRR1 136 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 DCAF13Q9NV06 445 aaKnown RBP1.87□□□□□ -2.11
RPA3-207ENST00000483031 MRPL22Q9NWU5 206 aaKnown RBP1.87□□□□□ -2.11
RPA3-207ENST00000483031 ZNF586Q9NXT0 402 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 SMPD3Q9NY59 655 aaPredicted RBP1.87□□□□□ -2.11
RPA3-207ENST00000483031 MTCH1Q9NZJ7 389 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 CD300AQ9UGN4 299 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 ZNF230Q9UIE0 474 aaPredicted RBP1.87□□□□□ -2.11
RPA3-207ENST00000483031 RIMS3Q9UJD0 308 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 EMCNQ9ULC0 261 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 SAMD4AQ9UPU9 718 aaKnown RBP1.87□□□□□ -2.11
RPA3-207ENST00000483031 RNF24Q9Y225 148 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 PUS1Q9Y606 427 aaKnown RBP eCLIP1.87□□□□□ -2.11
RPA3-207ENST00000483031 V9GYQ6 96 aa1.87□□□□□ -2.11
RPA3-207ENST00000483031 IGHV3OR16-12A0A075B7B8 117 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 MEIKINA0A087WXM9 373 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 TRBV2A0A0J9YWF9 115 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 SMIM9A6NGZ8 99 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 PPP5D1E7EU14 171 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 SIRPB1O00241 398 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 CTDSPLO15194 276 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 SLC22A1O15245 554 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 MAGEB4O15481 346 aaPredicted RBP1.86□□□□□ -2.11
RPA3-207ENST00000483031 OR2H2O95918 312 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 CA2P00918 260 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 IGLV2-8P01709 118 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 CHRNGP07510 517 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 SNRPCP09234 159 aaKnown RBP1.86□□□□□ -2.11
RPA3-207ENST00000483031 HSD17B1P14061 328 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 GZMHP20718 246 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 RPS27P42677 84 aaKnown RBP1.86□□□□□ -2.11
RPA3-207ENST00000483031 GLP1RP43220 463 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 TFPI2P48307 235 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 ALDH3B2P48448 385 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 CRISP1P54107 249 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 PLTPP55058 493 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 RPL37AP61513 92 aaKnown RBP1.86□□□□□ -2.11
RPA3-207ENST00000483031 ST3GAL3Q11203 375 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 ASAH1Q13510 395 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 FXYD3Q14802 87 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 TEX30Q5JUR7 227 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 GLT8D1Q68CQ7 371 aa1.86□□□□□ -2.11
RPA3-207ENST00000483031 CAVIN1Q6NZI2 390 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms