RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 FOXA2Q9Y261 457 aaPredicted RBP3.59□□□□□ -1.83
SHANK2-216ENST00000482659 A0A0G2JLM5 398 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 MSGN1A6NI15 193 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 MARCH11A6NNE9 402 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 FAM229AH3BQW9 127 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 UPK2O00526 184 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 FCN1O00602 326 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 ARPC1BO15143 372 aaKnown RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 ATP6V0E1O15342 81 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 RAMP3O60896 148 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 KBTBD11O94819 623 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 KRASP01116 189 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 IGLV2-23P01705 113 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 SAA1P0DJI8 122 aaPredicted RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 IL7P13232 177 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 HLA-GP17693 338 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 CNTFRP26992 372 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 PPIFP30405 207 aaKnown RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 LPAR6P43657 344 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 CDX1P47902 265 aaPredicted RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 RAB25P57735 213 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 BRWD1-AS2P59051 145 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 UBE2MP61081 183 aaKnown RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 GNB1P62873 340 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 RPL8P62917 257 aaKnown RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 CD83Q01151 205 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 RBMS2Q15434 407 aaKnown RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 TNXAQ16473 311 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 ZNF585BQ52M93 769 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 TMEM128Q5BJH2 165 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 PRR31Q5SQ13 230 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 OR4A47Q6IF82 309 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 MZT2BQ6NZ67 158 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 UNQ5815/PRO19632Q6UWF5 114 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 H2BFWTQ7Z2G1 175 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 ZNF329Q86UD4 541 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 ZNF695Q8IW36 515 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 FAM219AQ8IW50 185 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 PUSL1Q8N0Z8 303 aaKnown RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 RNF152Q8N8N0 203 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 MINDY2Q8NBR6 621 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 OR4D10Q8NGI6 311 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 OR1L6Q8NGR2 347 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 OR13C8Q8NGS7 320 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 OR5B3Q8NH48 314 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 GRPEL2Q8TAA5 225 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 MARCH1Q8TCQ1 289 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 SRSF12Q8WXF0 261 aaKnown RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 TAF15Q92804 592 aaKnown RBP eCLIP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 IL22RA2Q969J5 263 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 R3HDM4Q96D70 268 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 GALNT14Q96FL9 552 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 C5orf30Q96GV9 206 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 UBE2E2Q96LR5 201 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 CITED2Q99967 270 aaPredicted RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 HSPB9Q9BQS6 159 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 PDCD10Q9BUL8 212 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 FXYD6Q9H0Q3 95 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 NAA60Q9H7X0 242 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 TMEM140Q9NV12 185 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 THYN1Q9P016 225 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 PRNDQ9UKY0 176 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 ZNF257Q9Y2Q1 563 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 NUBP2Q9Y5Y2 271 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 CSPG4Q6UVK1 2322 aa3.58□□□□□ -1.84
SHANK2-216ENST00000482659 FN1P02751 2386 aaKnown RBP3.58□□□□□ -1.84
SHANK2-216ENST00000482659 A0A1W2PN81 502 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 DUXBA0A1W2PPF3 345 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 CRYM-AS1A6NIL9 109 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 SH2D7A6NKC9 451 aaPredicted RBP3.57□□□□□ -1.84
SHANK2-216ENST00000482659 LINC01548A6NM66 108 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 NUDT19A8MXV4 375 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 RBMXL2O75526 392 aaKnown RBP3.57□□□□□ -1.84
SHANK2-216ENST00000482659 S1PR2O95136 353 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 NDUFB6O95139 128 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 DUS4LO95620 317 aaKnown RBP3.57□□□□□ -1.84
SHANK2-216ENST00000482659 CDS2O95674 445 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 IGLV1-40P01703 118 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 IL6RP08887 468 aaPredicted RBP3.57□□□□□ -1.84
SHANK2-216ENST00000482659 TRAPPC2P0DI81 140 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 TRAPPC2BP0DI82 140 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 PF4V1P10720 104 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 CD28P10747 220 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 HIST1H1BP16401 226 aaKnown RBP3.57□□□□□ -1.84
SHANK2-216ENST00000482659 AKR1C4P17516 323 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 CR1P17927 2039 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 PI3P19957 117 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 UCP1P25874 307 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 PSMB8P28062 276 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 G6PCP35575 357 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 CHRNA7P36544 502 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 RPL27AP46776 148 aaKnown RBP3.57□□□□□ -1.84
SHANK2-216ENST00000482659 RAB9AP51151 201 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 AKR1C2P52895 323 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 DEFA1P59665 94 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 DEFA3P59666 94 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 CFHR3Q02985 330 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 BAK1Q16611 211 aa3.57□□□□□ -1.84
SHANK2-216ENST00000482659 ECSCRQ19T08 205 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms