RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 MALRD1Q5VYJ5 2156 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 ARHGAP32A7KAX9 2087 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 UBE2L5PA0A1B0GUS4 154 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 MAP1LC3B2A6NCE7 125 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 P0C879 139 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 IRF2P14316 349 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 PRB3Q04118 309 aaPredicted RBP11.9□□□□□ -0.5
CHD3-211ENST00000481999 PMS2P11Q13670 270 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 ZNF674Q2M3X9 581 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 OR8G2PQ6IF36 304 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 ZNF788Q6ZQV5 615 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 SSX7Q7RTT5 188 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 TCTEX1D1Q8N7M0 179 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 CA5BP1Q8WTZ4 195 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 MAP1LC3BQ9GZQ8 125 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 TMPRSS5Q9H3S3 457 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.9□□□□□ -0.5
CHD3-211ENST00000481999 URGCP-MRPS24S4R325 110 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 TNCP24821 2201 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 CXCL1P09341 107 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 FGF8P55075 233 aaPredicted RBP11.9□□□□□ -0.5
CHD3-211ENST00000481999 DLX1P56177 255 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 ATP6V1FQ16864 119 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 SDSLQ96GA7 329 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 IFI27L2Q9H2X8 130 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 TMEM242Q9NWH2 141 aa11.9□□□□□ -0.5
CHD3-211ENST00000481999 CELSR2Q9HCU4 2923 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 LRRC30A6NM36 301 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 CLN5O75503 358 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 CCL3L1P16619 93 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 GZMHP20718 246 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 CHRNB4P30926 498 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 ELLP55199 621 aaPredicted RBP11.89□□□□□ -0.51
CHD3-211ENST00000481999 PRAMEF5Q5TYX0 476 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 CENPVQ7Z7K6 275 aaPredicted RBP11.89□□□□□ -0.51
CHD3-211ENST00000481999 Q8TCH9 128 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 NIT2Q9NQR4 276 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 CGB3P0DN86 165 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 CGB7P0DN87 165 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 GPR12P47775 334 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 HTD2P86397 168 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 PAX5Q02548 391 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 CT45A1Q5HYN5 189 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 CT45A3Q8NHU0 189 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 PPP1R35Q8TAP8 253 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 ZDHHC16Q969W1 377 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 SLC39A9Q9NUM3 307 aa11.89□□□□□ -0.51
CHD3-211ENST00000481999 TGIF2-C20orf24A0A0A6YYL0 155 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 CEBPZOSA8MTT3 80 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 M0R1X1 148 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 FCGR3BO75015 233 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 HOXA5P20719 270 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 LHX4Q969G2 390 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 TMEM147Q9BVK8 224 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 LAMP3Q9UQV4 416 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 TMEM178BH3BS89 294 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 CD3EP07766 207 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 ADH4P08319 380 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 OR13D1Q8NGV5 346 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 CIB3Q96Q77 187 aaPredicted RBP11.88□□□□□ -0.51
CHD3-211ENST00000481999 SDF2L1Q9HCN8 221 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 TMEM106BQ9NUM4 274 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 CTSZQ9UBR2 303 aa11.88□□□□□ -0.51
CHD3-211ENST00000481999 TET2Q6N021 2002 aaPredicted RBP11.87□□□□□ -0.51
CHD3-211ENST00000481999 KBTBD11-OT1A0A1B0GTJ5 212 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 CLDN34H7C241 214 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 MBP02144 154 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 FABP1P07148 127 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 DUTP33316 252 aaKnown RBP11.87□□□□□ -0.51
CHD3-211ENST00000481999 TEX36Q5VZQ5 186 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 ZNF66Q6ZN08 573 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 C1orf87Q8N0U7 546 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 RPP25LQ8N5L8 163 aaKnown RBP11.87□□□□□ -0.51
CHD3-211ENST00000481999 SLC25A10Q9UBX3 287 aaPredicted RBP11.87□□□□□ -0.51
CHD3-211ENST00000481999 CLN8Q9UBY8 286 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 F2RL2O00254 374 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 RAB29O14966 203 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 CYB5BO43169 146 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 RND2P52198 227 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 CR1LQ2VPA4 569 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 DTD1Q8TEA8 209 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 BBC3Q96PG8 261 aaPredicted RBP11.87□□□□□ -0.51
CHD3-211ENST00000481999 GSN-AS1Q9NRJ2 163 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 OR6C3Q9NZP0 311 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 JPT1Q9UK76 154 aa11.87□□□□□ -0.51
CHD3-211ENST00000481999 SAA2-SAA4A0A096LPE2 208 aa11.86□□□□□ -0.51
CHD3-211ENST00000481999 TRGV10A0A0A0MS01 117 aa11.86□□□□□ -0.51
CHD3-211ENST00000481999 MARCH11A6NNE9 402 aa11.86□□□□□ -0.51
CHD3-211ENST00000481999 TGOLN2O43493 480 aa11.86□□□□□ -0.51
CHD3-211ENST00000481999 SAA2P0DJI9 122 aaPredicted RBP11.86□□□□□ -0.51
CHD3-211ENST00000481999 CDX1P47902 265 aaPredicted RBP11.86□□□□□ -0.51
CHD3-211ENST00000481999 H2BFWTQ7Z2G1 175 aa11.86□□□□□ -0.51
CHD3-211ENST00000481999 OR10P1Q8NGE3 313 aa11.86□□□□□ -0.51
CHD3-211ENST00000481999 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
CHD3-211ENST00000481999 HSD17B10Q99714 261 aaKnown RBP11.86□□□□□ -0.51
CHD3-211ENST00000481999 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
CHD3-211ENST00000481999 NGBQ9NPG2 151 aa11.86□□□□□ -0.51
CHD3-211ENST00000481999 DOK5Q9P104 306 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms