RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 MAPK3P27361 379 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-224ENST00000481929 HLA-DMBP28068 263 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 TMEM187Q14656 261 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 ZNF124Q15973 351 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 ZNF645Q8N7E2 425 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 TMEM190Q8WZ59 177 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 CMSS1Q9BQ75 279 aaKnown RBP10.9□□□□□ -0.66
HDAC6-224ENST00000481929 DCUN1D5Q9BTE7 237 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 ZNF436Q9C0F3 470 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-224ENST00000481929 DAZ1Q9NQZ3 744 aaKnown RBP10.9□□□□□ -0.66
HDAC6-224ENST00000481929 TMEM14DPA8MWL7 114 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 FABP7O15540 132 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 CDK2AP2O75956 126 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 AREGP15514 252 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 CMC4P56277 68 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-224ENST00000481929 KLK9Q2XQG4 91 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 C1orf146Q5VVC0 180 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 Q6ZTC4 211 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 OR6M1Q8NGM8 313 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 OR10J5Q8NHC4 309 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 APH1BQ8WW43 257 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 URM1Q9BTM9 101 aaKnown RBP10.89□□□□□ -0.67
HDAC6-224ENST00000481929 OR51E2Q9H255 320 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 CLEC2DQ9UHP7 191 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 KLK9Q9UKQ9 250 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 HSF4Q9ULV5 492 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 HERC1Q15751 4861 aa10.89□□□□□ -0.67
HDAC6-224ENST00000481929 IGLV11-55A0A075B6I3 123 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 IRGMA1A4Y4 181 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 CTSDP07339 412 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-224ENST00000481929 ZNF735P0CB33 412 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 RPA2P15927 270 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 PSMD7P51665 324 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 TAS2R43P59537 309 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 SMN1Q16637 294 aaKnown RBP10.88□□□□□ -0.67
HDAC6-224ENST00000481929 IGSF11Q5DX21 431 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 C1orf100Q5SVJ3 147 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 Q8NAQ8 132 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 ZNF502Q8TBZ5 544 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 CABLES2Q9BTV7 478 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 LPAR5Q9H1C0 372 aa10.88□□□□□ -0.67
HDAC6-224ENST00000481929 DIMT1Q9UNQ2 313 aaKnown RBP10.88□□□□□ -0.67
HDAC6-224ENST00000481929 E7EUB6 86 aa10.87□□□□□ -0.67
HDAC6-224ENST00000481929 FCGR3BO75015 233 aa10.87□□□□□ -0.67
HDAC6-224ENST00000481929 KBTBD11O94819 623 aa10.87□□□□□ -0.67
HDAC6-224ENST00000481929 BPNT1O95861 308 aa10.87□□□□□ -0.67
HDAC6-224ENST00000481929 AMBPP02760 352 aa10.87□□□□□ -0.67
HDAC6-224ENST00000481929 MAS1LP35410 378 aa10.87□□□□□ -0.67
HDAC6-224ENST00000481929 QRFPP83859 136 aa10.87□□□□□ -0.67
HDAC6-224ENST00000481929 SOHLH1Q5JUK2 328 aa10.87□□□□□ -0.67
HDAC6-224ENST00000481929 VSTM2AQ8TAG5 236 aa10.87□□□□□ -0.67
HDAC6-224ENST00000481929 TRBV6-7A0A0A0MS04 114 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 A0A1B0GW64 132 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 TGOLN2O43493 480 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 MRPS14O60783 128 aaKnown RBP10.86□□□□□ -0.67
HDAC6-224ENST00000481929 REG1AP05451 166 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 MRPS15P82914 257 aaKnown RBP10.86□□□□□ -0.67
HDAC6-224ENST00000481929 ARFRP1Q13795 201 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 VKORC1L1Q8N0U8 176 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 CBR4Q8N4T8 237 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 FAM89BQ8N5H3 189 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 ARHGAP5-AS1Q96IT6 56 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 OR2A7Q96R45 310 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 GINS4Q9BRT9 223 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 PECRQ9BY49 303 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 MRPS7Q9Y2R9 242 aaKnown RBP10.86□□□□□ -0.67
HDAC6-224ENST00000481929 PRELID3BQ9Y3B1 194 aa10.86□□□□□ -0.67
HDAC6-224ENST00000481929 IGHV4-28A0A0C4DH34 117 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 LOC100130705A0A1B0GUX0 176 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 FOXI3A8MTJ6 420 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-224ENST00000481929 C16orf90A8MZG2 172 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 DIRAS3O95661 229 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 CELP19835 753 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 TFPI2P48307 235 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 RBM48Q5RL73 367 aaKnown RBP10.85□□□□□ -0.67
HDAC6-224ENST00000481929 KCTD9Q7L273 389 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 SSX9Q7RTT3 188 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 ZNF485Q8NCK3 441 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 TMEM167AQ8TBQ9 72 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 C20orf24Q9BUV8 137 aa10.85□□□□□ -0.67
HDAC6-224ENST00000481929 DMBT1Q9UGM3 2413 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-224ENST00000481929 WBP4O75554 376 aaKnown RBP10.84□□□□□ -0.67
HDAC6-224ENST00000481929 RBMY1A1P0DJD3 496 aaKnown RBP10.84□□□□□ -0.67
HDAC6-224ENST00000481929 RBMY1CP0DJD4 496 aa10.84□□□□□ -0.67
HDAC6-224ENST00000481929 PTBP1P26599 531 aaKnown RBP eCLIP10.84□□□□□ -0.67
HDAC6-224ENST00000481929 TMEM50BP56557 158 aa10.84□□□□□ -0.67
HDAC6-224ENST00000481929 IRF3Q14653 427 aa10.84□□□□□ -0.67
HDAC6-224ENST00000481929 RBMY1FQ15415 496 aaKnown RBP10.84□□□□□ -0.67
HDAC6-224ENST00000481929 OR2B11Q5JQS5 317 aa10.84□□□□□ -0.67
HDAC6-224ENST00000481929 LRRTM1Q86UE6 522 aa10.84□□□□□ -0.67
HDAC6-224ENST00000481929 Q8N1X5 172 aa10.84□□□□□ -0.67
HDAC6-224ENST00000481929 NDUFAF3Q9BU61 184 aa10.84□□□□□ -0.67
HDAC6-224ENST00000481929 THYN1Q9P016 225 aa10.84□□□□□ -0.67
HDAC6-224ENST00000481929 IGLV2-18A0A075B6J9 118 aa10.83□□□□□ -0.68
HDAC6-224ENST00000481929 C15orf61A6NNL5 157 aa10.83□□□□□ -0.68
HDAC6-224ENST00000481929 NDUFA4O00483 81 aa10.83□□□□□ -0.68
HDAC6-224ENST00000481929 ZNF207O43670 478 aaKnown RBP10.83□□□□□ -0.68
HDAC6-224ENST00000481929 CD1AP06126 327 aa10.83□□□□□ -0.68
HDAC6-224ENST00000481929 MIFP14174 115 aa10.83□□□□□ -0.68
HDAC6-224ENST00000481929 CRHBPP24387 322 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms