RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 POMT1Q9Y6A1 747 aa8.16□□□□□ -1.1
USP39-215ENST00000481409 CSMD2Q7Z408 3487 aa8.16□□□□□ -1.1
USP39-215ENST00000481409 A0A0U1RQK1 487 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 BTBD17A6NE02 478 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 CCSO14618 274 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 RRHO14718 337 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 FGF16O43320 207 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 SIX6O95475 246 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 IGLV2-23P01705 113 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 CRYGBP07316 175 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 SAA1P0DJI8 122 aaPredicted RBP8.15□□□□□ -1.1
USP39-215ENST00000481409 SLC25A4P12235 298 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 LYL1P12980 280 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 CD99P14209 185 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 TMEM11P17152 192 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 ATP5IP56385 69 aaPredicted RBP8.15□□□□□ -1.1
USP39-215ENST00000481409 SPCS3P61009 180 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 RPL8P62917 257 aaKnown RBP8.15□□□□□ -1.1
USP39-215ENST00000481409 RELBQ01201 579 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 MMDQ15546 238 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 RUSC1-AS1Q66K80 236 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 C11orf87Q6NUJ2 197 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 TMEM65Q6PI78 240 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 BRD3OSQ6XYD6 125 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 HSD17B13Q7Z5P4 300 aaPredicted RBP8.15□□□□□ -1.1
USP39-215ENST00000481409 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 TMEM86BQ8N661 226 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 THAP6Q8TBB0 222 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 RAB40CQ96S21 281 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 SRSF8Q9BRL6 282 aaKnown RBP8.15□□□□□ -1.1
USP39-215ENST00000481409 CHIAQ9BZP6 476 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 GSKIPQ9P0R6 139 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 HSPB7Q9UBY9 170 aa8.15□□□□□ -1.1
USP39-215ENST00000481409 ABCA1O95477 2261 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 IGHV3-72A0A0B4J1Y9 119 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 A0A0G2JRQ6 117 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 SRRM4A7MD48 611 aaKnown RBP8.14□□□□□ -1.11
USP39-215ENST00000481409 HMSDA8MTL9 139 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 MPTX1A8MV57 137 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 E5RGE8 158 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 INS-IGF2F8WCM5 200 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 WRBO00258 174 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 GPR137BO60478 399 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 RBMXL2O75526 392 aaKnown RBP8.14□□□□□ -1.11
USP39-215ENST00000481409 DEDDO75618 318 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 ACTL6BO94805 426 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 OR2F2O95006 317 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 MPC2O95563 127 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 HSPE1P61604 102 aaKnown RBP8.14□□□□□ -1.11
USP39-215ENST00000481409 RPP30P78346 268 aaKnown RBP8.14□□□□□ -1.11
USP39-215ENST00000481409 TNFRSF9Q07011 255 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 HES1Q14469 280 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 PSG5Q15238 335 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 ZFP69Q49AA0 526 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 FAM120AOSQ5T036 256 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 PRSS54Q6PEW0 395 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 PPP1R27Q86WC6 154 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 C17orf50Q8WW18 174 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 RBM14Q96PK6 669 aaKnown RBP8.14□□□□□ -1.11
USP39-215ENST00000481409 CLCC1Q96S66 551 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 SSX3Q99909 188 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 COMMD5Q9GZQ3 224 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 YAE1D1Q9NRH1 226 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 CDC42EP3Q9UKI2 254 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 NSG2Q9Y328 171 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 SIGLEC9Q9Y336 463 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 WSB1Q9Y6I7 421 aa8.14□□□□□ -1.11
USP39-215ENST00000481409 A0A1W2PN81 502 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 SYNGR2O43760 224 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 TSPAN9O75954 239 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 MBPP02686 304 aaPredicted RBP8.13□□□□□ -1.11
USP39-215ENST00000481409 OR9G9P0C7N8 305 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 C4BPBP20851 252 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 CHRNA7P36544 502 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 SRP14P37108 136 aaKnown RBP8.13□□□□□ -1.11
USP39-215ENST00000481409 RAB32Q13637 225 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 PLGLAQ15195 96 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 PRSS8Q16651 343 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 C5orf64Q2M2E5 130 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 Q6YL49 198 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 Q6ZRM9 215 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 SSX9Q7RTT3 188 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 NOXA1Q86UR1 476 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 FAM71E2Q8N5Q1 922 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 OR1L8Q8NGR8 309 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 SSMEM1Q8WWF3 244 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 METTL1Q9UBP6 276 aaKnown RBP8.13□□□□□ -1.11
USP39-215ENST00000481409 TCF19Q9Y242 345 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 MOB4Q9Y3A3 225 aa8.13□□□□□ -1.11
USP39-215ENST00000481409 ASH1LQ9NR48 2969 aaKnown RBP8.13□□□□□ -1.11
USP39-215ENST00000481409 IGHV3OR16-10A0A075B7F0 116 aa8.12□□□□□ -1.11
USP39-215ENST00000481409 K7EPK0 472 aa8.12□□□□□ -1.11
USP39-215ENST00000481409 L7N2F9 121 aa8.12□□□□□ -1.11
USP39-215ENST00000481409 SLC25A17O43808 307 aa8.12□□□□□ -1.11
USP39-215ENST00000481409 IFNA17P01571 189 aa8.12□□□□□ -1.11
USP39-215ENST00000481409 HLA-DRB1P01911 266 aa8.12□□□□□ -1.11
USP39-215ENST00000481409 HNRNPCP07910 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
USP39-215ENST00000481409 NUP62P37198 522 aaPredicted RBP8.12□□□□□ -1.11
USP39-215ENST00000481409 IER3P46695 156 aa8.12□□□□□ -1.11
USP39-215ENST00000481409 P2RY1P47900 373 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms