RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 ATG101Q9BSB4 218 aa8.06□□□□□ -1.12
GARNL3-216ENST00000481242 SEMA5BQ9P283 1151 aa8.06□□□□□ -1.12
GARNL3-216ENST00000481242 TCF19Q9Y242 345 aa8.06□□□□□ -1.12
GARNL3-216ENST00000481242 LINC00312Q9Y6C7 94 aa8.06□□□□□ -1.12
GARNL3-216ENST00000481242 PIN1P1O15428 100 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 VSIG10L2P0DP72 767 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 CXCL2P19875 107 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 NPPCP23582 126 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 GAGE1Q13065 139 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 HLA-DRB5Q30154 266 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 TM2D1Q9BX74 207 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 PATJQ8NI35 1801 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 NPIPB6E9PJ23 425 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 NDUFS6O75380 124 aaKnown RBP8.05□□□□□ -1.12
GARNL3-216ENST00000481242 PF4P02776 101 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 STAG3L3P0CL85 134 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 PMCHP20382 165 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 CRYBA2P53672 197 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 UNC119Q13432 240 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 FXYD3Q14802 87 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 ALKBH7Q9BT30 221 aaPredicted RBP8.05□□□□□ -1.12
GARNL3-216ENST00000481242 IGKV3D-15A0A087WSY6 115 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 SLC17A3O00476 420 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 Q1RN00 199 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 TMEM97Q5BJF2 176 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 NUP37Q8NFH4 326 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 OR51G1Q8NGK1 321 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 GATAD1Q8WUU5 269 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 TMEM191AQ9H0A3 160 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 CD74P04233 296 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 PRSS1P07477 247 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 SNRPD3P62318 126 aaKnown RBP8.05□□□□□ -1.12
GARNL3-216ENST00000481242 PSG7Q13046 419 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 CYB5R2Q6BCY4 276 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 HCP5Q6MZN7 132 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 OR4X2Q8NGF9 303 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 SMIM8Q96KF7 97 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 MRPL32Q9BYC8 188 aaKnown RBP8.05□□□□□ -1.12
GARNL3-216ENST00000481242 PRR13Q9NZ81 148 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 PSME4Q14997 1843 aa8.05□□□□□ -1.12
GARNL3-216ENST00000481242 A0A0B4J293 547 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 TCTAP57738 103 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 ZIC4Q8N9L1 334 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 OR1P1Q8NH06 330 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 NEUROG3Q9Y4Z2 214 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 COL6A6A6NMZ7 2263 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 RAMP1O60894 148 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 ZNF253O75346 499 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 MT-ND6P03923 174 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 MELTFP08582 738 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 C8orf88P0DMB2 117 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 APELAP0DMC3 54 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 AREGP15514 252 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 CACNA1DQ01668 2161 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 TAF15Q92804 592 aaKnown RBP eCLIP8.04□□□□□ -1.12
GARNL3-216ENST00000481242 GPR146Q96CH1 333 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 MRPL13Q9BYD1 178 aaKnown RBP8.04□□□□□ -1.12
GARNL3-216ENST00000481242 GSX1Q9H4S2 264 aaPredicted RBP8.04□□□□□ -1.12
GARNL3-216ENST00000481242 PLSCR2Q9NRY7 297 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 CDC42EP3Q9UKI2 254 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 KBTBD11-OT1A0A1B0GTJ5 212 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 NPIPB7O75200 414 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 HTN1P15515 57 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 RELBQ01201 579 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 OR5AU1Q8NGC0 362 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 TBX15Q96SF7 602 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 TLNRD1Q9H1K6 362 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 RBKSQ9H477 322 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 SRD5A3Q9H8P0 318 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 C19orf67A6NJJ6 358 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 BCL2P10415 239 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 NPBWR2P48146 333 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 CEBPDP49716 269 aaPredicted RBP8.04□□□□□ -1.12
GARNL3-216ENST00000481242 RPL24P83731 157 aaKnown RBP8.04□□□□□ -1.12
GARNL3-216ENST00000481242 PMCHL1Q16048 86 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 C20orf204Q6ZNR8 217 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 C1QL4Q86Z23 238 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 DRAM1Q8N682 238 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 LRRC75AQ8NAA5 344 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 FAM131CQ96AQ9 280 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 NPFFR1Q9GZQ6 430 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 AICDAQ9GZX7 198 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 MSRB2Q9Y3D2 182 aa8.04□□□□□ -1.12
GARNL3-216ENST00000481242 MTCL1Q9Y4B5 1905 aaKnown RBP8.03□□□□□ -1.12
GARNL3-216ENST00000481242 RPS11P62280 158 aaKnown RBP eCLIP8.03□□□□□ -1.12
GARNL3-216ENST00000481242 TMEM183AQ8IXX5 376 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 SELENOHQ8IZQ5 122 aaKnown RBP8.03□□□□□ -1.12
GARNL3-216ENST00000481242 C7orf69Q9H7B7 122 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 RALGAPA1Q6GYQ0 2036 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.03□□□□□ -1.12
GARNL3-216ENST00000481242 A1L4Q6 167 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 TGFAP01135 160 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 WNT5AP41221 380 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 TBR1Q16650 682 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 ZNRF1Q8ND25 227 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 HSPB7Q9UBY9 170 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 LCTP09848 1927 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 C17orf51A8MQB3 221 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 RND3P61587 244 aa8.03□□□□□ -1.12
GARNL3-216ENST00000481242 HERPUD1Q15011 391 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms