RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 C16orf82Q7Z2V1 217 aa16.02■□□□□ 0.15
CCM2-214ENST00000481194 KIAA1324LA8MWY0 1029 aaPredicted RBP16.02■□□□□ 0.15
CCM2-214ENST00000481194 ITGB1BP1O14713 200 aa16.02■□□□□ 0.15
CCM2-214ENST00000481194 SLC35E3Q7Z769 313 aa16.02■□□□□ 0.15
CCM2-214ENST00000481194 ZNF429Q86V71 674 aa16.02■□□□□ 0.15
CCM2-214ENST00000481194 P2RX4Q99571 388 aa16.02■□□□□ 0.15
CCM2-214ENST00000481194 MINOS1Q5TGZ0 78 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 STPG2Q8N412 459 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 TMEM204Q9BSN7 226 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 VAX2Q9UIW0 290 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 MINOS1-NBL1R4GNA1 71 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 OR2C1O95371 312 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 TAF15Q92804 592 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCM2-214ENST00000481194 ZNF331Q9NQX6 463 aaPredicted RBP16.01■□□□□ 0.15
CCM2-214ENST00000481194 PXMP4Q9Y6I8 212 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 IGKV1D-8A0A087WSZ0 117 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 TMEM200BQ69YZ2 307 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 PDE6DO43924 150 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 TXNDC17Q9BRA2 123 aa16.01■□□□□ 0.15
CCM2-214ENST00000481194 SLC16A13Q7RTY0 426 aa16■□□□□ 0.15
CCM2-214ENST00000481194 PRORYQ9H606 182 aa16■□□□□ 0.15
CCM2-214ENST00000481194 IGKV1D-33P01593 117 aa16■□□□□ 0.15
CCM2-214ENST00000481194 IGKV1-33P01594 117 aa16■□□□□ 0.15
CCM2-214ENST00000481194 IGHV1-8P0DP01 117 aa16■□□□□ 0.15
CCM2-214ENST00000481194 DUTP33316 252 aaKnown RBP16■□□□□ 0.15
CCM2-214ENST00000481194 FAM74A3Q4VXF1 159 aa16■□□□□ 0.15
CCM2-214ENST00000481194 TEX45Q8NA69 505 aa16■□□□□ 0.15
CCM2-214ENST00000481194 OR4P4Q8NGL7 312 aa16■□□□□ 0.15
CCM2-214ENST00000481194 TXN2Q99757 166 aa16■□□□□ 0.15
CCM2-214ENST00000481194 RNF5Q99942 180 aa16■□□□□ 0.15
CCM2-214ENST00000481194 CLN5O75503 358 aa16■□□□□ 0.15
CCM2-214ENST00000481194 S100A8P05109 93 aa16■□□□□ 0.15
CCM2-214ENST00000481194 OR10J1P30954 320 aa15.99■□□□□ 0.15
CCM2-214ENST00000481194 UPK2O00526 184 aa15.99■□□□□ 0.15
CCM2-214ENST00000481194 PNRC1Q12796 327 aaPredicted RBP15.99■□□□□ 0.15
CCM2-214ENST00000481194 PSMG3Q9BT73 122 aaPredicted RBP15.99■□□□□ 0.15
CCM2-214ENST00000481194 ANAPC10Q9UM13 185 aa15.99■□□□□ 0.15
CCM2-214ENST00000481194 LINC00862A6NCI5 91 aa15.99■□□□□ 0.15
CCM2-214ENST00000481194 TGFAP01135 160 aa15.99■□□□□ 0.15
CCM2-214ENST00000481194 PSG5Q15238 335 aa15.99■□□□□ 0.15
CCM2-214ENST00000481194 TMEM241Q24JQ0 296 aa15.99■□□□□ 0.15
CCM2-214ENST00000481194 SP5Q6BEB4 398 aaPredicted RBP15.99■□□□□ 0.15
CCM2-214ENST00000481194 RBM14Q96PK6 669 aaKnown RBP15.99■□□□□ 0.15
CCM2-214ENST00000481194 DNAJC13O75165 2243 aa15.99■□□□□ 0.15
CCM2-214ENST00000481194 Q6ZR03 302 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 F12P00748 615 aaPredicted RBP15.98■□□□□ 0.15
CCM2-214ENST00000481194 MYPOPQ86VE0 399 aaPredicted RBP15.98■□□□□ 0.15
CCM2-214ENST00000481194 VKORC1L1Q8N0U8 176 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 EEF1AKMT3Q96AZ1 226 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 COQ2Q96H96 371 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 DNASE2O00115 360 aaPredicted RBP15.98■□□□□ 0.15
CCM2-214ENST00000481194 ERVK11-1P61568 191 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 ATP5G2Q06055 141 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 TEX36Q5VZQ5 186 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 RNF144BQ7Z419 303 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 NEUROG1Q92886 237 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 WDR61Q9GZS3 305 aaKnown RBP15.98■□□□□ 0.15
CCM2-214ENST00000481194 ZNF705GA8MUZ8 300 aaPredicted RBP15.98■□□□□ 0.15
CCM2-214ENST00000481194 NBR2O15453 112 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 GNG4P50150 75 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 ZNF90Q03938 601 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 IGHV2-26A0A0B4J1V2 119 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 A0A1W2PS18 150 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 GALR1P47211 349 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 RAB9AP51151 201 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 HCP5Q6MZN7 132 aa15.98■□□□□ 0.15
CCM2-214ENST00000481194 B4DSR2 109 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 PPP5D1E7EU14 171 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 J3QKU1 62 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 TFF1P04155 84 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 RNASEH2CQ8TDP1 164 aaKnown RBP15.97■□□□□ 0.15
CCM2-214ENST00000481194 APELAP0DMC3 54 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 BLNKQ8WV28 456 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 C1orf147Q96MC9 270 aaPredicted RBP15.97■□□□□ 0.15
CCM2-214ENST00000481194 PCDH15Q96QU1 1955 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 C15orf61A6NNL5 157 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 BMPR1BO00238 502 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 FGF8P55075 233 aaPredicted RBP15.97■□□□□ 0.15
CCM2-214ENST00000481194 OR4C12Q96R67 309 aa15.97■□□□□ 0.15
CCM2-214ENST00000481194 CLEC12BQ2HXU8 276 aa15.96■□□□□ 0.15
CCM2-214ENST00000481194 MBNL3Q9NUK0 354 aaKnown RBP15.96■□□□□ 0.15
CCM2-214ENST00000481194 PF4V1P10720 104 aa15.96■□□□□ 0.15
CCM2-214ENST00000481194 FER1L5A0AVI2 2057 aa15.96■□□□□ 0.15
CCM2-214ENST00000481194 C11orf94C9JXX5 98 aa15.96■□□□□ 0.15
CCM2-214ENST00000481194 OR8I2Q8N0Y5 310 aa15.96■□□□□ 0.15
CCM2-214ENST00000481194 MRPL32Q9BYC8 188 aaKnown RBP15.96■□□□□ 0.15
CCM2-214ENST00000481194 METRNQ9UJH8 293 aa15.96■□□□□ 0.15
CCM2-214ENST00000481194 RND2P52198 227 aa15.96■□□□□ 0.14
CCM2-214ENST00000481194 OR52E5Q8NH55 327 aa15.96■□□□□ 0.14
CCM2-214ENST00000481194 ARPC1AQ92747 370 aa15.96■□□□□ 0.14
CCM2-214ENST00000481194 BET1LQ9NYM9 111 aa15.96■□□□□ 0.14
CCM2-214ENST00000481194 ATG2AQ2TAZ0 1938 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 C20orf202A1L168 122 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 COL8A2P25067 703 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 RELQ04864 619 aaPredicted RBP15.95■□□□□ 0.14
CCM2-214ENST00000481194 NAT8Q9UHE5 227 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 TRAV20A0A0B4J274 112 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 A0A0B4J293 547 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 ZNF320A2RRD8 509 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 LY6EQ16553 131 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms