RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 TMEM38BQ9NVV0 291 aa3.08□□□□□ -1.92
UPF3A-207ENST00000481131 PEF1Q9UBV8 284 aaKnown RBP3.08□□□□□ -1.92
UPF3A-207ENST00000481131 POFUT2Q9Y2G5 429 aa3.08□□□□□ -1.92
UPF3A-207ENST00000481131 USF3Q68DE3 2245 aa3.08□□□□□ -1.92
UPF3A-207ENST00000481131 MYO9AB2RTY4 2548 aa3.08□□□□□ -1.92
UPF3A-207ENST00000481131 YLPM1P49750 1951 aaKnown RBP3.07□□□□□ -1.92
UPF3A-207ENST00000481131 CELSR1Q9NYQ6 3014 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 ARID1AO14497 2285 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 ARPC4-TTLL3A0A0A6YYG9 625 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 IGHV2OR16-5A0A0B4J2B6 119 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 ARRDC5A6NEK1 342 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 TVP23AA6NH52 213 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 G3V2T6 193 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 SOCS1O15524 211 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 SLC16A7O60669 478 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 MMP7P09237 267 aaPredicted RBP3.07□□□□□ -1.92
UPF3A-207ENST00000481131 ZNF14P17017 642 aaPredicted RBP3.07□□□□□ -1.92
UPF3A-207ENST00000481131 BMI1P35226 326 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 POLR2IP36954 125 aaKnown RBP3.07□□□□□ -1.92
UPF3A-207ENST00000481131 IFNGR2P38484 337 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 ERVS71-1P61550 626 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 ELF3P78545 371 aaPredicted RBP3.07□□□□□ -1.92
UPF3A-207ENST00000481131 LPCAT4Q643R3 524 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 KDM4DQ6B0I6 523 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 VKORC1L1Q8N0U8 176 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 OR6V1Q8N148 313 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 C17orf78Q8N4C9 275 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 SLC22A24Q8N4F4 322 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 LINC00471Q8N535 108 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 OR10W1Q8NGF6 305 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 COQ8AQ8NI60 647 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 TEX47Q8TBZ9 253 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 SLC7A6Q92536 515 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 MUCL1Q96DR8 90 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 RBMXL1Q96E39 390 aaKnown RBP3.07□□□□□ -1.92
UPF3A-207ENST00000481131 CENPNQ96H22 339 aaPredicted RBP3.07□□□□□ -1.92
UPF3A-207ENST00000481131 TTTY10Q9BZA0 68 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 SLIRPQ9GZT3 109 aaKnown RBP3.07□□□□□ -1.92
UPF3A-207ENST00000481131 GABARAPL1Q9H0R8 117 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 PLEKHF2Q9H8W4 249 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 IL20Q9NYY1 176 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 OPN4Q9UHM6 478 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 LHFPL6Q9Y693 200 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 COMMD3-BMI1R4GMX3 469 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 ZNF469Q96JG9 3925 aaPredicted RBP3.07□□□□□ -1.92
UPF3A-207ENST00000481131 ABCA2Q9BZC7 2435 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 CCDC168Q8NDH2 2452 aa3.07□□□□□ -1.92
UPF3A-207ENST00000481131 MAST4O15021 2626 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 ITPR3Q14573 2671 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 OTOGQ6ZRI0 2925 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 SMIM26A0A096LP01 95 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 TMEM223A0PJW6 202 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 C5orf63A6NC05 138 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 RIIAD1A6NNX1 92 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 CENPBD1B2RD01 187 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 E7EQL1 145 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 RER1O15258 196 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 MAGEB4O15481 346 aaPredicted RBP3.06□□□□□ -1.92
UPF3A-207ENST00000481131 FOXH1O75593 365 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 SNAP29O95721 258 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 RAB36O95755 333 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 SOD3P08294 240 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 ADRA2AP08913 450 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 MRPL3P09001 348 aaKnown RBP3.06□□□□□ -1.92
UPF3A-207ENST00000481131 CST2P09228 141 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 TACSTD2P09758 323 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 CBR1P16152 277 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 SPI1P17947 270 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 MSR1P21757 451 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 PFN2P35080 140 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 PEX19P40855 299 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 CACNG7P62955 275 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 MAP1AP78559 2803 aaPredicted RBP3.06□□□□□ -1.92
UPF3A-207ENST00000481131 CDK5Q00535 292 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 PSG4Q00888 419 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 NOTCH2Q04721 2471 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 EIF4EBP1Q13541 118 aaPredicted RBP3.06□□□□□ -1.92
UPF3A-207ENST00000481131 PABPC1L2AQ5JQF8 200 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 ZNF684Q5T5D7 378 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 LINC01590Q5TEZ4 76 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 RPL13AP3Q6NVV1 102 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 ZFP1Q6P2D0 407 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 SLC16A13Q7RTY0 426 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 ZNF101Q8IZC7 436 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 PROKR2Q8NFJ6 384 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 SLC26A10Q8NG04 563 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 OR6K6Q8NGW6 343 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 C11orf40Q8WZ69 217 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 RAB1CQ92928 201 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 POP5Q969H6 163 aaKnown RBP3.06□□□□□ -1.92
UPF3A-207ENST00000481131 FLYWCH2Q96CP2 140 aaKnown RBP3.06□□□□□ -1.92
UPF3A-207ENST00000481131 ZMYND19Q96E35 227 aaPredicted RBP3.06□□□□□ -1.92
UPF3A-207ENST00000481131 ZNF488Q96MN9 340 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 RBP7Q96R05 134 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 AMELYQ99218 206 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 BCL7BQ9BQE9 202 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 OR2H1Q9GZK4 316 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 NDEL1Q9GZM8 345 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 CMC2Q9NRP2 79 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 TVP23BQ9NYZ1 205 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms