RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 IZUMO1RA6ND01 250 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 DSCR4P56555 118 aaPredicted RBP8.88□□□□□ -0.99
SIK3-210ENST00000480468 RELBQ01201 579 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 TNXAQ16473 311 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 NRN1LQ496H8 165 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 CENPWQ5EE01 88 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 TREML4Q6UXN2 200 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 LHFPL4Q7Z7J7 247 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 PLXDC1Q8IUK5 500 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 FGFBP3Q8TAT2 258 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 MEGF9Q9H1U4 602 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 MBNL3Q9NUK0 354 aaKnown RBP8.88□□□□□ -0.99
SIK3-210ENST00000480468 WASHC3Q9Y3C0 194 aa8.88□□□□□ -0.99
SIK3-210ENST00000480468 A0A0J9YW62 118 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 GJE1A6NN92 205 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 M0R2Z0 102 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 NEURL1O76050 574 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 NUDT3O95989 172 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 PSG9Q00887 426 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 FAM162BQ5T6X4 162 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 Q6P435 159 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 H2BFWTQ7Z2G1 175 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 TNFRSF14Q92956 283 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 MGST2Q99735 147 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 TMEM70Q9BUB7 260 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 PKIBQ9C010 78 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 COMMD5Q9GZQ3 224 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 SAP30LQ9HAJ7 183 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 FGF21Q9NSA1 209 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 PEF1Q9UBV8 284 aaKnown RBP8.87□□□□□ -0.99
SIK3-210ENST00000480468 USP34Q70CQ2 3546 aa8.87□□□□□ -0.99
SIK3-210ENST00000480468 HELTA6NFD8 242 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 CGAP01215 116 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 IGLC1P0CG04 106 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 CCL5P13501 91 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 RAC3P60763 192 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 RPS16P62249 146 aaKnown RBP8.86□□□□□ -0.99
SIK3-210ENST00000480468 SMIM21Q3B7S5 101 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 TIGITQ495A1 244 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 SLC25A34Q6PIV7 304 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 SPACA3Q8IXA5 215 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 OR4S2Q8NH73 311 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 SLC25A40Q8TBP6 338 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 TAAR6Q96RI8 345 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 SRXN1Q9BYN0 137 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 ZNF430Q9H8G1 570 aaPredicted RBP8.86□□□□□ -0.99
SIK3-210ENST00000480468 ZNF331Q9NQX6 463 aaPredicted RBP8.86□□□□□ -0.99
SIK3-210ENST00000480468 CRIM1Q9NZV1 1036 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 IGHV1OR21-1A0A087WYE8 117 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 ZIC3O60481 467 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 OR2J3O76001 311 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 LIFP15018 202 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 USF1P22415 310 aaPredicted RBP8.86□□□□□ -0.99
SIK3-210ENST00000480468 CRYBB3P26998 211 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 S100A7P31151 101 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 NTF4P34130 210 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 RPL30P62888 115 aaKnown RBP8.86□□□□□ -0.99
SIK3-210ENST00000480468 CFHR1Q03591 330 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 CEACAM16Q2WEN9 425 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 RNFT1Q5M7Z0 435 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 AAED1Q7RTV5 226 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 MRPL21Q7Z2W9 205 aaKnown RBP8.86□□□□□ -0.99
SIK3-210ENST00000480468 TMEM45BQ96B21 275 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 GP6Q9HCN6 339 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 SLC25A10Q9UBX3 287 aaPredicted RBP8.86□□□□□ -0.99
SIK3-210ENST00000480468 TRAPPC2LQ9UL33 140 aa8.86□□□□□ -0.99
SIK3-210ENST00000480468 MUC21A0A0G2JKD1 596 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 MUC21A0A140T8X8 626 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 FAM90A9PA6NNJ1 464 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 ZNF716A6NP11 495 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 PRSS46E5RG02 174 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 SPINK4O60575 86 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 SS18L1O75177 396 aaPredicted RBP8.85□□□□□ -0.99
SIK3-210ENST00000480468 ZNF816Q0VGE8 651 aaPredicted RBP8.85□□□□□ -0.99
SIK3-210ENST00000480468 SLAQ13239 276 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 MUC21Q5SSG8 566 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 PRAMEF20Q5VT98 475 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 MIC13Q5XKP0 118 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 MRPL54Q6P161 138 aaKnown RBP8.85□□□□□ -0.99
SIK3-210ENST00000480468 DEFB126Q9BYW3 111 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 TNFRSF19Q9NS68 423 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 DEPPQ9NTK1 212 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 TECRQ9NZ01 308 aaKnown RBP8.85□□□□□ -0.99
SIK3-210ENST00000480468 LSM4Q9Y4Z0 139 aaKnown RBP8.85□□□□□ -0.99
SIK3-210ENST00000480468 OR4C46A6NHA9 309 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 LMO7DNF2Z398 122 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 DUX1O43812 170 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 SSTR5P35346 364 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 CA7P43166 264 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 BRWD1-AS2P59051 145 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 GNG3P63215 75 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 EFNB3Q15768 340 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 PQLC2Q6ZP29 291 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 ABHD3Q8WU67 409 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 C5orf30Q96GV9 206 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 CRISPLD2Q9H0B8 497 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 RNASE7Q9H1E1 156 aaKnown RBP8.85□□□□□ -0.99
SIK3-210ENST00000480468 PRDM6Q9NQX0 595 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 TMEM167BQ9NRX6 74 aa8.85□□□□□ -0.99
SIK3-210ENST00000480468 C17orf98A8MV24 154 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms