RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 PXMP4Q9Y6I8 212 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 CACNA1DQ01668 2161 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 RPL39P5Q59GN2 51 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 C9orf152Q5JTZ5 239 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 CST9LP1Q5W188 147 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 SSX9Q7RTT3 188 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 ADTRPQ96IZ2 230 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 MS4A5Q9H3V2 200 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 NPVFQ9HCQ7 196 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 C15orf61A6NNL5 157 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 AMBPP02760 352 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 GLRXP35754 106 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 ZNF134P52741 427 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 FOXL1Q12952 345 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 GCSAMLQ5JQS6 135 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 TIMM23BQ5SRD1 257 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 OR2V2Q96R30 315 aa20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 FOXA2Q9Y261 457 aaPredicted RBP20.34■□□□□ 0.85
SYNGAP1-206ENST00000479510 FNDC10F2Z333 226 aa20.33■□□□□ 0.85
SYNGAP1-206ENST00000479510 GATA4P43694 442 aa20.33■□□□□ 0.85
SYNGAP1-206ENST00000479510 THBS3P49746 956 aa20.33■□□□□ 0.85
SYNGAP1-206ENST00000479510 GAMTQ14353 236 aa20.33■□□□□ 0.85
SYNGAP1-206ENST00000479510 FAM222BQ8WU58 562 aa20.33■□□□□ 0.85
SYNGAP1-206ENST00000479510 DIDO1Q9BTC0 2240 aaKnown RBP20.33■□□□□ 0.84
SYNGAP1-206ENST00000479510 TSTD3H0UI37 97 aa20.33■□□□□ 0.84
SYNGAP1-206ENST00000479510 ATP5G3P48201 142 aa20.33■□□□□ 0.84
SYNGAP1-206ENST00000479510 NUBP1P53384 320 aa20.33■□□□□ 0.84
SYNGAP1-206ENST00000479510 KLF3P57682 345 aaPredicted RBP20.33■□□□□ 0.84
SYNGAP1-206ENST00000479510 MSMPQ1L6U9 139 aa20.33■□□□□ 0.84
SYNGAP1-206ENST00000479510 TMEM30BQ3MIR4 351 aa20.33■□□□□ 0.84
SYNGAP1-206ENST00000479510 PCNX2A6NKB5 2137 aa20.32■□□□□ 0.84
SYNGAP1-206ENST00000479510 DOCK11Q5JSL3 2073 aa20.32■□□□□ 0.84
SYNGAP1-206ENST00000479510 CEACAM4O75871 244 aa20.32■□□□□ 0.84
SYNGAP1-206ENST00000479510 NDUFB4O95168 129 aa20.32■□□□□ 0.84
SYNGAP1-206ENST00000479510 DEFA4P12838 97 aa20.32■□□□□ 0.84
SYNGAP1-206ENST00000479510 TMEM144Q7Z5S9 345 aa20.32■□□□□ 0.84
SYNGAP1-206ENST00000479510 ARL14EPLP0DKL9 152 aa20.31■□□□□ 0.84
SYNGAP1-206ENST00000479510 POU2AF1Q16633 256 aa20.31■□□□□ 0.84
SYNGAP1-206ENST00000479510 MOGAT3Q86VF5 341 aa20.31■□□□□ 0.84
SYNGAP1-206ENST00000479510 LRP11Q86VZ4 500 aa20.31■□□□□ 0.84
SYNGAP1-206ENST00000479510 HSPE1P61604 102 aaKnown RBP20.31■□□□□ 0.84
SYNGAP1-206ENST00000479510 SRSF6Q13247 344 aaKnown RBP20.31■□□□□ 0.84
SYNGAP1-206ENST00000479510 RAB31Q13636 194 aa20.31■□□□□ 0.84
SYNGAP1-206ENST00000479510 PATZ1Q9HBE1 687 aaKnown RBP20.31■□□□□ 0.84
SYNGAP1-206ENST00000479510 TMEM14BQ9NUH8 114 aa20.31■□□□□ 0.84
SYNGAP1-206ENST00000479510 IGLV3-9A0A075B6K5 115 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 IGHV3OR15-7A0A075B7D8 119 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 KBTBD11-OT1A0A1B0GTJ5 212 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 GCGP01275 180 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 CRYAAP02489 173 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 RD3LP0DJH9 198 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 UBE2G2P60604 165 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 C17orf58Q2M2W7 97 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 IGF2-ASQ6U949 168 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 SEM1Q6ZVN7 128 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 ZNRF1Q8ND25 227 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 SFXN3Q9BWM7 321 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 PAX1P15863 534 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 CHRNA7P36544 502 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 ZNF83P51522 516 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 MIC13Q5XKP0 118 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 VKORC1L1Q8N0U8 176 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 ABHD12Q8N2K0 398 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 CORO2AQ92828 525 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 SDSLQ96GA7 329 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 FAM234AQ9H0X4 552 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 FUT9Q9Y231 359 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 NCOR1O75376 2440 aa20.3■□□□□ 0.84
SYNGAP1-206ENST00000479510 TRAV3A0A0B4J244 114 aa20.29■□□□□ 0.84
SYNGAP1-206ENST00000479510 MT-CO2P00403 227 aa20.29■□□□□ 0.84
SYNGAP1-206ENST00000479510 RHOBP62745 196 aa20.29■□□□□ 0.84
SYNGAP1-206ENST00000479510 TEPPQ6URK8 271 aa20.29■□□□□ 0.84
SYNGAP1-206ENST00000479510 LINC00469Q8N7U9 141 aa20.29■□□□□ 0.84
SYNGAP1-206ENST00000479510 RHOVQ96L33 236 aa20.29■□□□□ 0.84
SYNGAP1-206ENST00000479510 FTH1P19P0C7X4 201 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 NPY1RP25929 384 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 IL3RAP26951 378 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 CCKARP32238 428 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 RPL29P47914 159 aaKnown RBP20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 CT45A1Q5HYN5 189 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 FAM78BQ5VT40 261 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 SLC24A4Q8NFF2 622 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 CT45A3Q8NHU0 189 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 PLPPR2Q96GM1 343 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 SFRP2Q96HF1 295 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 LINC00574Q9H8X3 128 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 ENY2Q9NPA8 101 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 ARL2-SNX15V9GYD0 113 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 TRAV9-1A0A075B6T8 112 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 SLC31A2O15432 143 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 WT1P19544 449 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 ATP5IP56385 69 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 TMEM18Q96B42 140 aa20.28■□□□□ 0.84
SYNGAP1-206ENST00000479510 TRGV10A0A0A0MS01 117 aa20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 MDFIC2A0A1B0GVS7 189 aa20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 M0R1B8 84 aa20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 IL6RP08887 468 aaPredicted RBP20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 GZMBP10144 247 aa20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 RPL15P61313 204 aaKnown RBP20.27■□□□□ 0.84
SYNGAP1-206ENST00000479510 OR4A47Q6IF82 309 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms