RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 CCDC144NLQ6NUI1 221 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 LHFPL4Q7Z7J7 247 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 SLC25A42Q86VD7 318 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 HIST3H2BBQ8N257 126 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 ABHD12Q8N2K0 398 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 TPRX1Q8N7U7 411 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 HSD17B11Q8NBQ5 300 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 WFDC9Q8NEX5 89 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 OR5D18Q8NGL1 313 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 OR10D4PQ8NGN7 298 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 OR10R2Q8NGX6 335 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 RNASEH2CQ8TDP1 164 aaKnown RBP5.34□□□□□ -1.55
VCP-205ENST00000479300 GPX8Q8TED1 209 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 MITD1Q8WV92 249 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 TMED6Q8WW62 240 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 MAFIPQ8WZ33 124 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 PELI1Q96FA3 418 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 WWC2-AS2Q96NR7 200 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 AQP10Q96PS8 301 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 OR14A2Q96R54 314 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 PHB2Q99623 299 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 CITED2Q99967 270 aaPredicted RBP5.34□□□□□ -1.55
VCP-205ENST00000479300 HRH4Q9H3N8 390 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 ZNF702PQ9H963 129 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 SLC2A8Q9NY64 477 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 OR6C3Q9NZP0 311 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 DOK5Q9P104 306 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 ZNF230Q9UIE0 474 aaPredicted RBP5.34□□□□□ -1.55
VCP-205ENST00000479300 TCF19Q9Y242 345 aa5.34□□□□□ -1.55
VCP-205ENST00000479300 AMMECR1Q9Y4X0 333 aaPredicted RBP5.34□□□□□ -1.55
VCP-205ENST00000479300 A0A087WWC5 75 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 A0A0A6YYH2 397 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 IGHV2-26A0A0B4J1V2 119 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 A0A0B4J2A0 478 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 IGKV1-9A0A0C4DH69 117 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 A6NDX4 124 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 A6NJ64 397 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 FAM90A8PA6NJQ4 464 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 OR4C45A6NMZ5 311 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 ODF3BA8MYP8 253 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 M0QZK8 103 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 M0R036 132 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 GGCTO75223 188 aaKnown RBP5.33□□□□□ -1.56
VCP-205ENST00000479300 ADAP1O75689 374 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 RAB3DO95716 219 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 OR2H2O95918 312 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 CSTBP04080 98 aaKnown RBP5.33□□□□□ -1.56
VCP-205ENST00000479300 GAPDHP04406 335 aaKnown RBP5.33□□□□□ -1.56
VCP-205ENST00000479300 PET100P0DJ07 73 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 PGAM2P15259 253 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 OR3A1P47881 315 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 DYNLT3P51808 116 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 DLX6P56179 175 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 NDUFA6P56556 154 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 TAS2R31P59538 309 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 NANOS3P60323 173 aaKnown RBP5.33□□□□□ -1.56
VCP-205ENST00000479300 AESQ08117 197 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 KISS1Q15726 138 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 USF2Q15853 346 aaPredicted RBP5.33□□□□□ -1.56
VCP-205ENST00000479300 ACTBL2Q562R1 376 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 PRAMEF5Q5TYX0 476 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 PRSS54Q6PEW0 395 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 Q6ZS46 218 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 C16orf82Q7Z2V1 217 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 CENPVQ7Z7K6 275 aaPredicted RBP5.33□□□□□ -1.56
VCP-205ENST00000479300 TMEM219Q86XT9 240 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 C11orf42Q8N5U0 333 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 OR4F17Q8NGA8 305 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 OR52N4Q8NGI2 321 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 GPR148Q8TDV2 347 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 DCUN1D4Q92564 292 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 ANAPC16Q96DE5 110 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 SPACA5Q96QH8 159 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 OR4F4Q96R69 305 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 PRRT1Q99946 306 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 DPM3Q9P2X0 92 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 CKLFQ9UBR5 152 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 STEAP1Q9UHE8 339 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 SHPKQ9UHJ6 478 aa5.33□□□□□ -1.56
VCP-205ENST00000479300 TRBV5-5A0A0J9YX44 114 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 ODAMA1E959 279 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 SMCO3A2RU48 225 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 TRDCB7Z8K6 153 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 DLEU1O43261 78 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 PSPNO60542 156 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 ZFPL1O95159 310 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 OR2C1O95371 312 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 HLA-AP01891 365 aaKnown RBP5.32□□□□□ -1.56
VCP-205ENST00000479300 CD3DP04234 171 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 ZNF735P0CB33 412 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 CHATP28329 748 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 LPAR6P43657 344 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 GLIPR1P48060 266 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 SOX2P48431 317 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 DLK1P80370 383 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 ATXN7L3Q14CW9 347 aaPredicted RBP5.32□□□□□ -1.56
VCP-205ENST00000479300 JOSD1Q15040 202 aaPredicted RBP5.32□□□□□ -1.56
VCP-205ENST00000479300 HAGHQ16775 308 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 AKIRIN2Q53H80 203 aa5.32□□□□□ -1.56
VCP-205ENST00000479300 KHDC3LQ587J8 217 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms