RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 MEIS3P1A6NDR6 274 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 GABARAPO95166 117 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 EIF4EP06730 217 aaKnown RBP17.94■□□□□ 0.46
C9orf3-215ENST00000478473 NHLRC4P0CG21 123 aaPredicted RBP17.94■□□□□ 0.46
C9orf3-215ENST00000478473 GNRHRP30968 328 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 TAS2R46P59540 309 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 CATR1Q13166 79 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 CTF1Q16619 201 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 SPAG16Q8N0X2 631 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 CD300LFQ8TDQ1 290 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 MOB3AQ96BX8 217 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 AKIP1Q9NQ31 210 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 ZNF257Q9Y2Q1 563 aa17.94■□□□□ 0.46
C9orf3-215ENST00000478473 A0A1B0GW64 132 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 NPIPB5A8MRT5 1133 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 E7EUB6 86 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 HPRT1P00492 218 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 IGLV1-51P01701 117 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 FCER2P06734 321 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 CRYGCP07315 174 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 APELAP0DMC3 54 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 TAS2R31P59538 309 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 LYSMD2Q8IV50 215 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 CADM3Q8N126 398 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 OR4C12Q96R67 309 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 ELOVL1Q9BW60 279 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 PLEKHA2Q9HB19 425 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 SCPEP1Q9HB40 452 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 SLC2A9Q9NRM0 540 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 SIGLEC8Q9NYZ4 499 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 EHFQ9NZC4 300 aa17.93■□□□□ 0.46
C9orf3-215ENST00000478473 MPPED1O15442 326 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 TNFSF12O43508 249 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 RPL27AP46776 148 aaKnown RBP17.92■□□□□ 0.46
C9orf3-215ENST00000478473 RFX2P48378 723 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 FXYD4P59646 89 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 RPL8P62917 257 aaKnown RBP17.92■□□□□ 0.46
C9orf3-215ENST00000478473 RHOGP84095 191 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 FAM209BQ5JX69 171 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 C11orf87Q6NUJ2 197 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 IL34Q6ZMJ4 242 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 NECAP1Q8NC96 275 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 COMMD3Q9UBI1 195 aa17.92■□□□□ 0.46
C9orf3-215ENST00000478473 SULT1C2O00338 296 aa17.91■□□□□ 0.46
C9orf3-215ENST00000478473 SPNP16150 400 aa17.91■□□□□ 0.46
C9orf3-215ENST00000478473 RORCP51449 518 aa17.91■□□□□ 0.46
C9orf3-215ENST00000478473 HERV-K104P61576 105 aa17.91■□□□□ 0.46
C9orf3-215ENST00000478473 OR4A47Q6IF82 309 aa17.91■□□□□ 0.46
C9orf3-215ENST00000478473 ANKRD34BA5PLL1 514 aa17.9■□□□□ 0.46
C9orf3-215ENST00000478473 TRBV12-3P01733 135 aa17.9■□□□□ 0.46
C9orf3-215ENST00000478473 NQO2P16083 231 aa17.9■□□□□ 0.46
C9orf3-215ENST00000478473 TMEM17Q86X19 198 aa17.9■□□□□ 0.46
C9orf3-215ENST00000478473 OR9G4Q8NGQ1 327 aa17.9■□□□□ 0.46
C9orf3-215ENST00000478473 OR5H2Q8NGV7 314 aa17.9■□□□□ 0.46
C9orf3-215ENST00000478473 ZNF2Q9BSG1 426 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-215ENST00000478473 COMMD9Q9P000 198 aa17.9■□□□□ 0.46
C9orf3-215ENST00000478473 SMAD5-AS1Q9Y6J3 95 aa17.9■□□□□ 0.46
C9orf3-215ENST00000478473 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.89■□□□□ 0.45
C9orf3-215ENST00000478473 SMIM31A0A1B0GVY4 71 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 HMX3A6NHT5 357 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 CGB1A6NKQ9 187 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 TPPPO94811 219 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 GP9P14770 177 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 HLA-GP17693 338 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 ELK1P19419 428 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 DEFA5Q01523 94 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 ATP5G2Q06055 141 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 OR6F1Q8NGZ6 308 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 FANCD2OSQ96PS1 177 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 SRSF8Q9BRL6 282 aaKnown RBP17.89■□□□□ 0.45
C9orf3-215ENST00000478473 NAA50Q9GZZ1 169 aaKnown RBP17.89■□□□□ 0.45
C9orf3-215ENST00000478473 DMRT1Q9Y5R6 373 aa17.89■□□□□ 0.45
C9orf3-215ENST00000478473 PGLYRP1O75594 196 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-215ENST00000478473 PMP2P02689 132 aa17.88■□□□□ 0.45
C9orf3-215ENST00000478473 PRH1P02810 166 aa17.88■□□□□ 0.45
C9orf3-215ENST00000478473 CTRB1P17538 263 aa17.88■□□□□ 0.45
C9orf3-215ENST00000478473 ALDH3B2P48448 385 aa17.88■□□□□ 0.45
C9orf3-215ENST00000478473 CTRB2Q6GPI1 263 aa17.88■□□□□ 0.45
C9orf3-215ENST00000478473 SSX9Q7RTT3 188 aa17.88■□□□□ 0.45
C9orf3-215ENST00000478473 FYTTD1Q96QD9 318 aaKnown RBP17.88■□□□□ 0.45
C9orf3-215ENST00000478473 BMPR1BO00238 502 aa17.87■□□□□ 0.45
C9orf3-215ENST00000478473 UPK2O00526 184 aa17.87■□□□□ 0.45
C9orf3-215ENST00000478473 F2RP25116 425 aa17.87■□□□□ 0.45
C9orf3-215ENST00000478473 PSMB6P28072 239 aa17.87■□□□□ 0.45
C9orf3-215ENST00000478473 HRH1P35367 487 aa17.87■□□□□ 0.45
C9orf3-215ENST00000478473 EXOSC2Q13868 293 aaKnown RBP17.87■□□□□ 0.45
C9orf3-215ENST00000478473 TATDN3Q17R31 274 aa17.87■□□□□ 0.45
C9orf3-215ENST00000478473 AADACL3Q5VUY0 350 aa17.87■□□□□ 0.45
C9orf3-215ENST00000478473 FXYD6Q9H0Q3 95 aa17.87■□□□□ 0.45
C9orf3-215ENST00000478473 FAM212BQ9NTI7 297 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-215ENST00000478473 HPGDSO60760 199 aa17.86■□□□□ 0.45
C9orf3-215ENST00000478473 LY86O95711 162 aa17.86■□□□□ 0.45
C9orf3-215ENST00000478473 ZNF182P17025 639 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-215ENST00000478473 RCVRNP35243 200 aa17.86■□□□□ 0.45
C9orf3-215ENST00000478473 MECP2P51608 486 aaKnown RBP17.86■□□□□ 0.45
C9orf3-215ENST00000478473 SYNJ2BPP57105 145 aa17.86■□□□□ 0.45
C9orf3-215ENST00000478473 OR2B8PP59922 312 aa17.86■□□□□ 0.45
C9orf3-215ENST00000478473 C15orf32Q32M92 178 aa17.86■□□□□ 0.45
C9orf3-215ENST00000478473 MZT2AQ6P582 158 aa17.86■□□□□ 0.45
C9orf3-215ENST00000478473 OR51H1Q8NH63 302 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms