RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 KCNIP2Q9NS61 270 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 SLC39A9Q9NUM3 307 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 UFSP2Q9NUQ7 469 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 P4HTMQ9NXG6 502 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 TAAR3PQ9P1P4 343 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 PILRBQ9UKJ0 227 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 KCNS2Q9ULS6 477 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 RNF115Q9Y4L5 304 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 U3KQA8 63 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 GON4LQ3T8J9 2241 aa3.56□□□□□ -1.84
GPNMB-210ENST00000478451 CEP290O15078 2479 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 CABIN1Q9Y6J0 2220 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 A0A087WYN8 130 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 IGKV1D-13A0A0B4J2D9 117 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 H0YL77 283 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 H7BYZ3 331 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 DVL1O14640 695 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 SH2D1BO14796 132 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HMGB3O15347 200 aaKnown RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 PDE6DO43924 150 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H2BKO60814 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 SS18L1O75177 396 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 MPDU1O75352 247 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF737O75373 536 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 KBTBD11O94819 623 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 YIF1AO95070 293 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HRASP01112 189 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 GCGP01275 180 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 IGKV3-20P01619 116 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H2BJP06899 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 TRGC1P0CF51 173 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 IGKV1-13P0DP09 117 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 PSG2P11465 335 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 CD99P14209 185 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H1BP16401 226 aaKnown RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 TUBG1P23258 451 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H2BOP23527 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H2BBP33778 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 PAX9P55771 341 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H2BDP58876 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H2BCP62807 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 CCL20P78556 96 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 RUNX1Q01196 453 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 MEF2BQ02080 365 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ZFP36L1Q07352 338 aaKnown RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 MZT1Q08AG7 82 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 TMEM267Q0VDI3 215 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ADIRFQ15847 76 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST2H2BEQ16778 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 BSXQ3C1V8 233 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF672Q499Z4 452 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 TEX38Q6PEX7 206 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF497Q6ZNH5 498 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 P4HA3Q7Z4N8 544 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 TMEM183AQ8IXX5 376 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 C1orf174Q8IYL3 243 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST3H2BBQ8N257 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF525Q8N782 197 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF645Q8N7E2 425 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 WDR31Q8NA23 367 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF383Q8NA42 475 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 OR10D4PQ8NGN7 298 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 IL1F10Q8WWZ1 152 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 TAF15Q92804 592 aaKnown RBP eCLIP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H2BHQ93079 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 LHX4Q969G2 390 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 NOL4LQ96MY1 436 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 MS4A10Q96PG2 267 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H2BNQ99877 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 HIST1H2BMQ99879 126 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 SMIM7Q9BQ49 75 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 DDA1Q9BW61 102 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 WDR61Q9GZS3 305 aaKnown RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 OR51I2Q9H344 312 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 CDH20Q9HBT6 801 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 RAB9BQ9NP90 201 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 TUBG2Q9NRH3 451 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 MTCH1Q9NZJ7 389 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 CACNG5Q9UF02 275 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 ERRFI1Q9UJM3 462 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 TRAPPC2LQ9UL33 140 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 KLF13Q9Y2Y9 288 aaPredicted RBP3.55□□□□□ -1.84
GPNMB-210ENST00000478451 LOXL2Q9Y4K0 774 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 WDR87Q6ZQQ6 2873 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 SHANK1Q9Y566 2161 aa3.55□□□□□ -1.84
GPNMB-210ENST00000478451 YLPM1P49750 1951 aaKnown RBP3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TANC2Q9HCD6 1990 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TRAV9-1A0A075B6T8 112 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TGIF2-C20orf24A0A0A6YYL0 155 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 UBE2L5PA0A1B0GUS4 154 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 TMEM30CPA0ZSE6 113 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 OOEPA6NGQ2 149 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 C21orf140B9A014 251 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 F6UZH7 168 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 H3BP45 60 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 KLRC4-KLRK1H3BQV0 150 aa3.54□□□□□ -1.84
GPNMB-210ENST00000478451 J3QR06 171 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms