RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 OR1N2Q8NGR9 330 aa12.08□□□□□ -0.48
HMGA1-206ENST00000478214 VSTM2AQ8TAG5 236 aa12.08□□□□□ -0.48
HMGA1-206ENST00000478214 TMEM167AQ8TBQ9 72 aa12.08□□□□□ -0.48
HMGA1-206ENST00000478214 FCAMRQ8WWV6 532 aa12.08□□□□□ -0.48
HMGA1-206ENST00000478214 DIRAS2Q96HU8 199 aa12.08□□□□□ -0.48
HMGA1-206ENST00000478214 TMEM68Q96MH6 324 aa12.08□□□□□ -0.48
HMGA1-206ENST00000478214 SLA2Q9H6Q3 261 aa12.08□□□□□ -0.48
HMGA1-206ENST00000478214 CCDC160A6NGH7 325 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 H3BUA1 57 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 GABARAPH6UMI1 98 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 S1PR2O95136 353 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 HPRT1P00492 218 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 LGALS1P09382 135 aaKnown RBP12.07□□□□□ -0.48
HMGA1-206ENST00000478214 ZNF616Q08AN1 781 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 PHLDA2Q53GA4 152 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 RNASE10Q5GAN6 216 aaKnown RBP12.07□□□□□ -0.48
HMGA1-206ENST00000478214 OR4A47Q6IF82 309 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 CMTM1Q8IZ96 169 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 COA4Q9NYJ1 87 aa12.07□□□□□ -0.48
HMGA1-206ENST00000478214 MPPED1O15442 326 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 IFNA6P05013 189 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 NQO2P16083 231 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 HOXD3P31249 432 aaPredicted RBP12.06□□□□□ -0.48
HMGA1-206ENST00000478214 TAS2R31P59538 309 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 DEFA5Q01523 94 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 IL18Q14116 193 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 ADAD2Q8NCV1 583 aaKnown RBP12.06□□□□□ -0.48
HMGA1-206ENST00000478214 MCFD2Q8NI22 146 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 DPF1Q92782 380 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 SPIN2AQ99865 258 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 SPIN2BQ9BPZ2 258 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 MCRIP2Q9BUT9 160 aaKnown RBP12.06□□□□□ -0.48
HMGA1-206ENST00000478214 RSRP1Q9BUV0 290 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 RBM38Q9H0Z9 239 aaKnown RBP12.06□□□□□ -0.48
HMGA1-206ENST00000478214 PLEKHA2Q9HB19 425 aa12.06□□□□□ -0.48
HMGA1-206ENST00000478214 TRAV3A0A0B4J244 114 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 HMX3A6NHT5 357 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 E7EUB6 86 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 IL6RP08887 468 aaPredicted RBP12.05□□□□□ -0.48
HMGA1-206ENST00000478214 OR8U8P0C7N1 319 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 OR9G9P0C7N8 305 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 MYOD1P15172 320 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 RPA2P15927 270 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 TBPP20226 339 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 F2RP25116 425 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 LPAR6P43657 344 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 RPL27AP46776 148 aaKnown RBP12.05□□□□□ -0.48
HMGA1-206ENST00000478214 UCP3P55916 312 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 RPL8P62917 257 aaKnown RBP12.05□□□□□ -0.48
HMGA1-206ENST00000478214 MRPS10P82664 201 aaKnown RBP12.05□□□□□ -0.48
HMGA1-206ENST00000478214 POU2AF1Q16633 256 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 LPCAT3Q6P1A2 487 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 TMEM229BQ8NBD8 167 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 OR4D10Q8NGI6 311 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 SMIM4Q8WVI0 70 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 DGCR14Q96DF8 476 aaKnown RBP12.05□□□□□ -0.48
HMGA1-206ENST00000478214 AIFM2Q9BRQ8 373 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 NXF2Q9GZY0 626 aaKnown RBP12.05□□□□□ -0.48
HMGA1-206ENST00000478214 HRASLSQ9HDD0 168 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 BET1LQ9NYM9 111 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 COMMD9Q9P000 198 aa12.05□□□□□ -0.48
HMGA1-206ENST00000478214 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 A0A087WW49 117 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 A0A1B0GW64 132 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 RBMXL2O75526 392 aaKnown RBP12.04□□□□□ -0.48
HMGA1-206ENST00000478214 BRI3O95415 125 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 CD74P04233 296 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 HLA-GP17693 338 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 TNFSF8P32971 234 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 MAS1LP35410 378 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 TAS2R19P59542 299 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 KRTAP10-11P60412 298 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 ZNF585BQ52M93 769 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 LHFPL1Q86WI0 220 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 SLC38A6Q8IZM9 456 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 ARRDC1Q8N5I2 433 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 OR4A5Q8NH83 315 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 FYTTD1Q96QD9 318 aaKnown RBP12.04□□□□□ -0.48
HMGA1-206ENST00000478214 GPR61Q9BZJ8 451 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 TMEM140Q9NV12 185 aa12.04□□□□□ -0.48
HMGA1-206ENST00000478214 AURKAIP1Q9NWT8 199 aaPredicted RBP12.04□□□□□ -0.48
HMGA1-206ENST00000478214 RSL24D1Q9UHA3 163 aaKnown RBP12.04□□□□□ -0.48
HMGA1-206ENST00000478214 A0A0G2JLM5 398 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 C13orf42A0A1B0GVH6 325 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 LINC01619G3V211 115 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 UPK2O00526 184 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 CTDSPLO15194 276 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 RAB3DO95716 219 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 PRH1P02810 166 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 PGAM2P15259 253 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 SLURP1P55000 103 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 SSBP1Q04837 148 aaKnown RBP12.03□□□□□ -0.48
HMGA1-206ENST00000478214 STEAP1BQ6NZ63 245 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 C19orf35Q6ZS72 473 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 TBC1D26Q86UD7 250 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 TTC9CQ8N5M4 171 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 DMBX1Q8NFW5 382 aa12.03□□□□□ -0.48
HMGA1-206ENST00000478214 DCUN1D4Q92564 292 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms