RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TET2Q6N021 2002 aaPredicted RBP4.11□□□□□ -1.75
SF3B6-202ENST00000478050 JMJD1CQ15652 2540 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 IGHV2OR16-5A0A0B4J2B6 119 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 UBE2L5PA0A1B0GUS4 154 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 hCG_1809904A0A1W2PP81 198 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 A0A1W2PR64 198 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 A0A1W2PRV1 198 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 ODAMA1E959 279 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 MAP1LC3B2A6NCE7 125 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 LRRC30A6NM36 301 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 FAM90A9PA6NNJ1 464 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 AP4M1O00189 453 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 WNT9BO14905 357 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 NKX2-8O15522 239 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 SPINT2O43291 252 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 TGOLN2O43493 480 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 SOX15O60248 233 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 TOX4O94842 621 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 CLDN1O95832 211 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 IGHV2-5P01817 119 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 ARG1P05089 322 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 CECR9P0C854 216 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 DAOP14920 347 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 GABRA2P47869 451 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 GLIPR1P48060 266 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 CEBPDP49716 269 aaPredicted RBP4.1□□□□□ -1.75
SF3B6-202ENST00000478050 SNRPEP62304 92 aaKnown RBP4.1□□□□□ -1.75
SF3B6-202ENST00000478050 RPL30P62888 115 aaKnown RBP4.1□□□□□ -1.75
SF3B6-202ENST00000478050 DLK1P80370 383 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 HTD2P86397 168 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 COL10A1Q03692 680 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 AESQ08117 197 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 ARL16Q0P5N6 197 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF816Q0VGE8 651 aaPredicted RBP4.1□□□□□ -1.75
SF3B6-202ENST00000478050 P2RY6Q15077 328 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 IZUMO4Q1ZYL8 232 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 SPANXN5Q5MJ07 72 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 PRAMEF6Q5VXH4 476 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 VWA1Q6PCB0 445 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 HEPN1Q6WQI6 88 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 RBMS3Q6XE24 437 aaKnown RBP4.1□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF826PQ6ZT77 177 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 BHLHA15Q7RTS1 189 aaPredicted RBP4.1□□□□□ -1.75
SF3B6-202ENST00000478050 H2BFWTQ7Z2G1 175 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 MRGPRGQ86SM5 289 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 CYB561D1Q8N8Q1 229 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 NUDT10Q8NFP7 164 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 OR52L2PQ8NGH6 319 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 SPATA3Q8NHX4 192 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 UBALD1Q8TB05 177 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 TCTEX1D2Q8WW35 142 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 TAF15Q92804 592 aaKnown RBP eCLIP4.1□□□□□ -1.75
SF3B6-202ENST00000478050 ISOC2Q96AB3 205 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 NUDT11Q96G61 164 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 OR4C12Q96R67 309 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 RSG1Q9BU20 258 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 MAP1LC3BQ9GZQ8 125 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 RAB9BQ9NP90 201 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 ASCL3Q9NQ33 180 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 GNG13Q9P2W3 67 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 VAX2Q9UIW0 290 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 HIVEP1P15822 2718 aa4.1□□□□□ -1.75
SF3B6-202ENST00000478050 IGHV1-18A0A0C4DH31 117 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 CTXND1A0A1B0GTU2 59 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 MBD3L4A6NDZ8 208 aaPredicted RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 MBD3L3A6NE82 208 aaPredicted RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 MBD3L5A6NJ08 208 aaPredicted RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 OR5H1A6NKK0 313 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 ZFP92A6NM28 416 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 C17orf98A8MV24 154 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 SRRM5B3KS81 715 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 C17orf112F2Z3M2 114 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 C15orf65H3BRN8 121 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 ITGB1BP1O14713 200 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 EIF3GO75821 320 aaKnown RBP eCLIP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 CEACAM4O75871 244 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 S1PR2O95136 353 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 TNFRSF6BO95407 300 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 PTBP3O95758 552 aaKnown RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 CYB5R3P00387 301 aaPredicted RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 GZMHP20718 246 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 G6PCP35575 357 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 CFHR2P36980 270 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 KIR2DS2P43631 304 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 RND2P52198 227 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 CEBPGP53567 150 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 RAB11AP62491 216 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF726P1Q15940 193 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 VWC2Q2TAL6 325 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 FAM90A2PQ658T7 463 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 OR8G2PQ6IF36 304 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 ADAM5Q6NVV9 412 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 LCN15Q6UWW0 184 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 Q6ZR03 302 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF808Q8N4W9 903 aaPredicted RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF709Q8N972 641 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 OR10P1Q8NGE3 313 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 OR13A1Q8NGR1 328 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 OR13D1Q8NGV5 346 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms