RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 A0A087WUU8 490 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 TRAV25A0A0B4J276 109 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 TRBV7-9A0A0J9YWB2 115 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 A0A0U1RQV5 110 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 FAM231BA6NCW3 169 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 TRPC5OSA6NMA1 111 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 LOC110117498-PIK3R3F6TDL0 507 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 ZNF593O00488 134 aaPredicted RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 RIPK2O43353 540 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 NRASP01111 189 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 TRGV3P03979 118 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 BPGMP07738 259 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 CGB3P0DN86 165 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 CGB7P0DN87 165 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 PRB4P10163 310 aaPredicted RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 H2AFXP16104 143 aaPredicted RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 PTBP1P26599 531 aaKnown RBP eCLIP2.99□□□□□ -1.93
VPS50-214ENST00000477935 BLVRBP30043 206 aaPredicted RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 HTR1FP30939 366 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 FMO3P31513 532 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 ACTBP60709 375 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 GNG11P61952 73 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 CKAP4Q07065 602 aaKnown RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 AESQ08117 197 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 MMDQ15546 238 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 CYP51A1Q16850 503 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 C5orf64Q2M2E5 130 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 SPIN3Q5JUX0 258 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 ZNF57Q68EA5 555 aaPredicted RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 ASCL4Q6XD76 172 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 LINC00596Q86U02 117 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 MSRB3Q8IXL7 192 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 SLC38A6Q8IZM9 456 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 LINC00311Q8N616 119 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 EIF1ADQ8N9N8 165 aaKnown RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 PROKR2Q8NFJ6 384 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 OR11H2Q8NH07 326 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 OR4K13Q8NH42 304 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 OR4A5Q8NH83 315 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 DEFB104AQ8WTQ1 72 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 RNF133Q8WVZ7 376 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 RTN4IP1Q8WWV3 396 aaPredicted RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 GALNT14Q96FL9 552 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 USMG5Q96IX5 58 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 ERMAPQ96PL5 475 aaPredicted RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 ZNF251Q9BRH9 671 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 SPXQ9BT56 116 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 OSBPL10Q9BXB5 764 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 ANKRD19PQ9H560 264 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 TMEM231Q9H6L2 316 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 IDI2-AS1Q9NZ38 188 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 VAPAQ9P0L0 249 aa2.99□□□□□ -1.93
VPS50-214ENST00000477935 RPL36Q9Y3U8 105 aaKnown RBP2.99□□□□□ -1.93
VPS50-214ENST00000477935 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 MUC2Q02817 5179 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 DSCAML1Q8TD84 2053 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 DEFB131BA0A096LNP1 70 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 DHRS12A0PJE2 317 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 PQLC2LA1A4F0 135 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 RNF222A6NCQ9 220 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 SDHDO14521 159 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 CYB5AP00167 134 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 OXTP01178 125 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 HIST1H1CP16403 213 aaKnown RBP2.98□□□□□ -1.93
VPS50-214ENST00000477935 HLA-DMBP28068 263 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 RPS27P42677 84 aaKnown RBP2.98□□□□□ -1.93
VPS50-214ENST00000477935 REG1BP48304 166 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 WNT4P56705 351 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 GAMTQ14353 236 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 Q3ZCU0 254 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 CLVS2Q5SYC1 327 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 DMKNQ6E0U4 476 aaPredicted RBP2.98□□□□□ -1.93
VPS50-214ENST00000477935 PPP1R27Q86WC6 154 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 OFCC1Q8IZS5 231 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 LINC00471Q8N535 108 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 CHST4Q8NCG5 386 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 NPBQ8NG41 125 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 OR56B1Q8NGI3 324 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 OR52M1Q8NGK5 317 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 CASTOR1Q8WTX7 329 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 THRSPQ92748 146 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 C16orf74Q96GX8 76 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 ANKRD60Q9BZ19 345 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 MTCH1Q9NZJ7 389 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 DNAJC27Q9NZQ0 273 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 GHRLQ9UBU3 117 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 U3KQV3 271 aa2.98□□□□□ -1.93
VPS50-214ENST00000477935 TVP23AA6NH52 213 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 C2orf70A6NJV1 201 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 ZNF736B4DX44 427 aaPredicted RBP2.97□□□□□ -1.93
VPS50-214ENST00000477935 UBDO15205 165 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 BIRC5O15392 142 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 NBR2O15453 112 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 H2BFMP0C1H6 154 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 GZMHP20718 246 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 CBLN1P23435 193 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 NPY1RP25929 384 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 VHLP40337 213 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 ZNF137PP52743 207 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 CMC4P56277 68 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms