RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 WNT10AQ9GZT5 417 aa8.18□□□□□ -1.1
CMC1-209ENST00000477739 PRDM13Q9H4Q3 707 aa8.18□□□□□ -1.1
CMC1-209ENST00000477739 SEBOXQ9HB31 216 aaPredicted RBP8.18□□□□□ -1.1
CMC1-209ENST00000477739 FOLR2P14207 255 aa8.18□□□□□ -1.1
CMC1-209ENST00000477739 PSG5Q15238 335 aa8.18□□□□□ -1.1
CMC1-209ENST00000477739 ASCL4Q6XD76 172 aa8.18□□□□□ -1.1
CMC1-209ENST00000477739 OR8I2Q8N0Y5 310 aa8.18□□□□□ -1.1
CMC1-209ENST00000477739 HIPK2Q9H2X6 1198 aa8.18□□□□□ -1.1
CMC1-209ENST00000477739 PITPNC1Q9UKF7 332 aa8.18□□□□□ -1.1
CMC1-209ENST00000477739 RNF115Q9Y4L5 304 aa8.18□□□□□ -1.1
CMC1-209ENST00000477739 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.17□□□□□ -1.1
CMC1-209ENST00000477739 A0A1W2PNU3 283 aaPredicted RBP8.17□□□□□ -1.1
CMC1-209ENST00000477739 SNURFLB1AK76 121 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 FOXH1O75593 365 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 CLDN14O95500 239 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 IL18BPO95998 194 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 OR5G3P0C626 314 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 TDRG1Q3Y452 100 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 DUX4L9Q6RFH8 374 aaPredicted RBP8.17□□□□□ -1.1
CMC1-209ENST00000477739 SPSB4Q96A44 273 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 TMEM147Q9BVK8 224 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 MPC1Q9Y5U8 109 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 CSMD1Q96PZ7 3565 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 OR5B21A6NL26 309 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 F2Z2F3 143 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 NUPR1O60356 82 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 ZNF883P0CG24 379 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 CD1BP29016 333 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 PKIAP61925 76 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 Q6ZSR3 168 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 DEFB124Q8NES8 71 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 NPCDR1Q9BY65 106 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 OR9G9P0C7N8 305 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 SUMO1P63165 101 aaKnown RBP8.17□□□□□ -1.1
CMC1-209ENST00000477739 CCL8P80075 99 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 FOXF2Q12947 444 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 TRIP6Q15654 476 aaKnown RBP8.17□□□□□ -1.1
CMC1-209ENST00000477739 LRRC75BQ2VPJ9 315 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 DEFB109BQ30KR1 87 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 ACOT6Q3I5F7 207 aaPredicted RBP8.17□□□□□ -1.1
CMC1-209ENST00000477739 NRN1LQ496H8 165 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 ST6GALNAC6Q969X2 333 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 S1PR3Q99500 378 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 TXN2Q99757 166 aa8.17□□□□□ -1.1
CMC1-209ENST00000477739 RNASE7Q9H1E1 156 aaKnown RBP8.17□□□□□ -1.1
CMC1-209ENST00000477739 RIMS4Q9H426 269 aaPredicted RBP8.17□□□□□ -1.1
CMC1-209ENST00000477739 ANKHD1Q8IWZ3 2542 aaKnown RBP8.16□□□□□ -1.1
CMC1-209ENST00000477739 GZMBP10144 247 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 PAX6P26367 422 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 IL3RAP26951 378 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 AMTP48728 403 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 CNN1P51911 297 aaKnown RBP8.16□□□□□ -1.1
CMC1-209ENST00000477739 UCP2P55851 309 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 GNB1P62873 340 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 LRTM2Q8N967 370 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 SNIP1Q8TAD8 396 aaKnown RBP8.16□□□□□ -1.1
CMC1-209ENST00000477739 MANBALQ9NQG1 85 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 CTXND1A0A1B0GTU2 59 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 C17orf112F2Z3M2 114 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 TGOLN2O43493 480 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 CGAP01215 116 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 TMEM11P17152 192 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 CRYBB3P26998 211 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 NUBP1P53384 320 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 DAZAP2Q15038 168 aaPredicted RBP8.16□□□□□ -1.1
CMC1-209ENST00000477739 COLCA1Q6ZS62 124 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 Q6ZVH6 145 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 CMTM2Q8TAZ6 248 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 MCRIP2Q9BUT9 160 aaKnown RBP8.16□□□□□ -1.1
CMC1-209ENST00000477739 CISD1Q9NZ45 108 aaKnown RBP8.16□□□□□ -1.1
CMC1-209ENST00000477739 PXMP4Q9Y6I8 212 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 LRRC30A6NM36 301 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 RNF212BA8MTL3 300 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 CDX4O14627 284 aaPredicted RBP8.16□□□□□ -1.1
CMC1-209ENST00000477739 KBTBD11O94819 623 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 COX5BP10606 129 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 CD24P25063 80 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 DMRTA1Q5VZB9 504 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 Q6ZR03 302 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 UHRF2Q96PU4 802 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 DECR2Q9NUI1 292 aa8.16□□□□□ -1.1
CMC1-209ENST00000477739 NCKAP5O14513 1909 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 HRASP01112 189 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 IRF2P14316 349 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 IGFBPL1Q8WX77 278 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 LINC00479Q96M42 142 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 SRD5A3Q9H8P0 318 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 SIRT7Q9NRC8 400 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 DCAF16Q9NXF7 216 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 PTPN13Q12923 2485 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A10PA6NDY2 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A18PA6NE21 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A16PA6NEW6 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A20PA6NIJ5 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A8PA6NJQ4 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A7PA6NKC0 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A22PA8MWA6 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A12PA8MX19 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A5PA8MXJ8 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A23PA8MXZ1 464 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms