RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ZNF525Q8N782 197 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 TMEM217Q8N7C4 229 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 OR4C13Q8NGP0 309 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 OR13D1Q8NGV5 346 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 LHX4Q969G2 390 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 ST6GALNAC6Q969X2 333 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 FLYWCH2Q96CP2 140 aaKnown RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 RBMXL1Q96E39 390 aaKnown RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 PATZ1Q9HBE1 687 aaKnown RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 TMEM14BQ9NUH8 114 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 UQCC1Q9NVA1 299 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 WASHC3Q9Y3C0 194 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 FBXO7Q9Y3I1 522 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 KLF2Q9Y5W3 355 aaPredicted RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 ASH1LQ9NR48 2969 aaKnown RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 PRRC2CQ9Y520 2896 aaKnown RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 PPIAL4CA0A0B4J2A2 164 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 TMEM218A2RU14 115 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 H0YJW9 148 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 UPK2O00526 184 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 NDUFS6O75380 124 aaKnown RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 MMP23AO75900 390 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 KBTBD11O94819 623 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 SOD3P08294 240 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 METTL15P1P0C7V9 234 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 PPIAL4GP0DN37 164 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 TAGLN2P37802 199 aaKnown RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 VDAC2P45880 294 aaPredicted RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 GPR6P46095 362 aaPredicted RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 OR2B8PP59922 312 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 DLK1P80370 383 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 PMS2P11Q13670 270 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 OR4A47Q6IF82 309 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 TGIF2LXQ8IUE1 241 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 ZNF709Q8N972 641 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 TAF15Q92804 592 aaKnown RBP eCLIP6.48□□□□□ -1.37
VMA21-203ENST00000477649 LEAP2Q969E1 77 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 BSCL2Q96G97 398 aaPredicted RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 NABP2Q9BQ15 211 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 CLEC7AQ9BXN2 247 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 QTRT1Q9BXR0 403 aaKnown RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 WDR61Q9GZS3 305 aaKnown RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 HRH4Q9H3N8 390 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 UNKLQ9H9P5 680 aaKnown RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 HEYLQ9NQ87 328 aaPredicted RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 TCF19Q9Y242 345 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 FLNBO75369 2602 aaKnown RBP6.48□□□□□ -1.37
VMA21-203ENST00000477649 BSNQ9UPA5 3926 aa6.48□□□□□ -1.37
VMA21-203ENST00000477649 HELZ2Q9BYK8 2649 aaKnown RBP6.47□□□□□ -1.37
VMA21-203ENST00000477649 KIAA2026Q5HYC2 2103 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 PIEZO2Q9H5I5 2752 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 DSCAMO60469 2012 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 KALRNO60229 2985 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 IGHV2-26A0A0B4J1V2 119 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 A0A1W2PN81 502 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 MEX3AA1L020 520 aaKnown RBP6.47□□□□□ -1.37
VMA21-203ENST00000477649 PMS2P5A8MQ11 134 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 OOSP1A8MZH6 123 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 B8ZZF3 427 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 H3BP45 60 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 H7C2Y5 167 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 FCN3O75636 299 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 NXPH3O95157 252 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 IGLV1-47P01700 117 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 CD5P06127 495 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 H2AFB1P0C5Y9 115 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 OR9G9P0C7N8 305 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 CHRNA7P36544 502 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 SNCAP37840 140 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 CEACAM3P40198 252 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 HOXA1P49639 335 aaPredicted RBP6.47□□□□□ -1.37
VMA21-203ENST00000477649 PRCDQ00LT1 54 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 ZNF616Q08AN1 781 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 TMEM267Q0VDI3 215 aaPredicted RBP6.47□□□□□ -1.37
VMA21-203ENST00000477649 HLA-DRB5Q30154 266 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 VMA21Q3ZAQ7 101 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 CLEC9AQ6UXN8 241 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 TMEM182Q6ZP80 229 aaPredicted RBP6.47□□□□□ -1.37
VMA21-203ENST00000477649 THNSL2Q86YJ6 484 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 SVBPQ8N300 66 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 C11orf42Q8N5U0 333 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 TEX45Q8NA69 505 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 OR1L8Q8NGR8 309 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 FAM213BQ8TBF2 198 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 TMEM167AQ8TBQ9 72 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 HARBI1Q96MB7 349 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 OR4C12Q96R67 309 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 SSBP3Q9BWW4 388 aaPredicted RBP6.47□□□□□ -1.37
VMA21-203ENST00000477649 SEC11CQ9BY50 192 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 PLEKHA3Q9HB20 300 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 KIAA1456Q9P272 454 aa6.47□□□□□ -1.37
VMA21-203ENST00000477649 CARHSP1Q9Y2V2 147 aaKnown RBP6.47□□□□□ -1.37
VMA21-203ENST00000477649 LOC105371242A0A075B767 164 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 A0A1W2PPE3 182 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 C15orf62A8K5M9 175 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 RNASEK-C17orf49H0YIS7 233 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 ENSAO43768 121 aaKnown RBP6.46□□□□□ -1.38
VMA21-203ENST00000477649 IFNA10P01566 189 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 IGHV3-7P01780 117 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 PRTN3P24158 256 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms