RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 OR2G3Q8NGZ4 309 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 OR4A16Q8NH70 328 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 DTD1Q8TEA8 209 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 GPHA2Q96T91 129 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 RNF5Q99942 180 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 TMEM133Q9H2Q1 129 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 DCAF16Q9NXF7 216 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 BET1LQ9NYM9 111 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 CTSZQ9UBR2 303 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 PRNDQ9UKY0 176 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 FOXA2Q9Y261 457 aaPredicted RBP5.46□□□□□ -1.54
LDB3-206ENST00000477489 AMMECR1Q9Y4X0 333 aaPredicted RBP5.46□□□□□ -1.54
LDB3-206ENST00000477489 DOCK11Q5JSL3 2073 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 A6NNC1 897 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 C15orf61A6NNL5 157 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 J3QR06 171 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 M0R1W7 72 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 PPIHO43447 177 aaKnown RBP5.45□□□□□ -1.54
LDB3-206ENST00000477489 MPDU1O75352 247 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 HBE1P02100 147 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 MBP02144 154 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 ARG1P05089 322 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 LIPFP07098 398 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 IGHV1-8P0DP01 117 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 GNLYP22749 145 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 NFYBP25208 207 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 LGALS7P47929 136 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 DYNLT3P51808 116 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 ERVFRD-1P60508 538 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 NHLH2Q02577 135 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 CDSNQ15517 529 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 LTC4SQ16873 150 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 VWC2Q2TAL6 325 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 LRRC75BQ2VPJ9 315 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 TMEM177Q53S58 311 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 RPL39P5Q59GN2 51 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 FAM74A1Q5RGS3 127 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 WDR25Q64LD2 544 aaPredicted RBP5.45□□□□□ -1.54
LDB3-206ENST00000477489 DUX4L9Q6RFH8 374 aaPredicted RBP5.45□□□□□ -1.54
LDB3-206ENST00000477489 BTNL8Q6UX41 500 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 BTNL3Q6UXE8 466 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 ZNF841Q6ZN19 808 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 MRPL41Q8IXM3 137 aaKnown RBP5.45□□□□□ -1.54
LDB3-206ENST00000477489 ZCCHC24Q8N2G6 241 aaKnown RBP5.45□□□□□ -1.54
LDB3-206ENST00000477489 LY6G5BQ8NDX9 201 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 OR10P1Q8NGE3 313 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 OR4C13Q8NGP0 309 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 OR10X1Q8NGY0 326 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 OR5B3Q8NH48 314 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 SCGB1C1Q8TD33 95 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 H1FXQ92522 213 aaKnown RBP5.45□□□□□ -1.54
LDB3-206ENST00000477489 ST6GALNAC6Q969X2 333 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 CXorf58Q96LI9 332 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 TMEM147Q9BVK8 224 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 MAGT1Q9H0U3 335 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 RBKSQ9H477 322 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 PATZ1Q9HBE1 687 aaKnown RBP5.45□□□□□ -1.54
LDB3-206ENST00000477489 WFDC1Q9HC57 220 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 KCNIP2Q9NS61 270 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 SLC35D1Q9NTN3 355 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 TMEM140Q9NV12 185 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 NUP50Q9UKX7 468 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 RNF114Q9Y508 228 aa5.45□□□□□ -1.54
LDB3-206ENST00000477489 ABCA4P78363 2273 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 TRAV1-1A0A0B4J248 108 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 CEBPZOSA8MTT3 80 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 OOSP1A8MZH6 123 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 H0YJW9 148 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 SLC31A2O15432 143 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 KCNAB3O43448 404 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 RBMXL2O75526 392 aaKnown RBP5.44□□□□□ -1.54
LDB3-206ENST00000477489 CT45A6P0DMU7 189 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 CT45A5P0DMU8 189 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 CT45A7P0DMV0 189 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 M6PRP20645 277 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 USF1P22415 310 aaPredicted RBP5.44□□□□□ -1.54
LDB3-206ENST00000477489 COL8A2P25067 703 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 ATP6V0CP27449 155 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 TAGLN2P37802 199 aaKnown RBP5.44□□□□□ -1.54
LDB3-206ENST00000477489 CAMLGP49069 296 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 EFNA4P52798 201 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 HSPE1P61604 102 aaKnown RBP5.44□□□□□ -1.54
LDB3-206ENST00000477489 RAB11AP62491 216 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 TLE4Q04727 773 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 SLC38A11Q08AI6 406 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 PMS2P11Q13670 270 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 PXDC1Q5TGL8 231 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 OR4A47Q6IF82 309 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 LYPD2Q6UXB3 125 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 TGIF2LYQ8IUE0 185 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 LILRB2Q8N423 598 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 ZNF525Q8N782 197 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 ZNF383Q8NA42 475 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 RBMXL1Q96E39 390 aaKnown RBP5.44□□□□□ -1.54
LDB3-206ENST00000477489 RHOVQ96L33 236 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 PBDC1Q9BVG4 233 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 CLEC7AQ9BXN2 247 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 SMIM3Q9BZL3 60 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 UNKLQ9H9P5 680 aaKnown RBP5.44□□□□□ -1.54
LDB3-206ENST00000477489 TMEM14BQ9NUH8 114 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms