RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ADTRPQ96IZ2 230 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 GNB4Q9HAV0 340 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 CHD8Q9HCK8 2581 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 SRP19P09132 144 aaKnown RBP9.25□□□□□ -0.93
COL27A1-204ENST00000477421 PMCHP20382 165 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 GCSAMLQ5JQS6 135 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 MRPL54Q6P161 138 aaKnown RBP9.25□□□□□ -0.93
COL27A1-204ENST00000477421 ZNF525Q8N782 197 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 SLC45A2Q9UMX9 530 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 INSIG2Q9Y5U4 225 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 ANKRD11Q6UB99 2663 aaPredicted RBP9.25□□□□□ -0.93
COL27A1-204ENST00000477421 SPTBN4Q9H254 2564 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 DNAH14Q0VDD8 3507 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 SLC25A17O43808 307 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 GATA2P23769 480 aaPredicted RBP9.25□□□□□ -0.93
COL27A1-204ENST00000477421 GLRXP35754 106 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 OR51G1Q8NGK1 321 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 OR10G8Q8NGN5 311 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 PARLQ9H300 379 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 MANBALQ9NQG1 85 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 ARHGAP21Q5T5U3 1957 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 H3BTX0 84 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 CCL21O00585 134 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 CNN1P51911 297 aaKnown RBP9.24□□□□□ -0.93
COL27A1-204ENST00000477421 MS4A5Q9H3V2 200 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 LPAR2Q9HBW0 351 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 PTPN13Q12923 2485 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 IGHV1-18A0A0C4DH31 117 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 DKK1O94907 266 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 SLC25A5P05141 298 aaKnown RBP9.24□□□□□ -0.93
COL27A1-204ENST00000477421 ARL14EPLP0DKL9 152 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 HOXB1P14653 301 aaPredicted RBP9.24□□□□□ -0.93
COL27A1-204ENST00000477421 RANP62826 216 aaKnown RBP9.24□□□□□ -0.93
COL27A1-204ENST00000477421 BORCS7Q96B45 105 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 EAF1Q96JC9 268 aaPredicted RBP9.24□□□□□ -0.93
COL27A1-204ENST00000477421 PACRGQ96M98 296 aaPredicted RBP9.24□□□□□ -0.93
COL27A1-204ENST00000477421 GP6Q9HCN6 339 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 PRNDQ9UKY0 176 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 AUP1Q9Y679 476 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 ADAMTS9Q9P2N4 1935 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 TMEM50AO95807 157 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 IGKV1-5P01602 117 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 CCL3L1P16619 93 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 LYZP61626 148 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 TIMM23BQ5SRD1 257 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 RPRMLQ8N4K4 120 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 LRTM2Q8N967 370 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 OR4X1Q8NH49 305 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 BTF3L4Q96K17 158 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 ZNF714Q96N38 554 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 TRANK1O15050 2925 aa9.24□□□□□ -0.93
COL27A1-204ENST00000477421 SEC14L6B5MCN3 397 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 RAB4AP20338 218 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 GNB2P62879 340 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 NMSQ5H8A3 153 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 LYPD6Q86Y78 171 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 LINC01560Q8TB33 94 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 HILPDAQ9Y5L2 63 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 TRBV23-1A0A0A0MS06 115 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 CEACAM18A8MTB9 384 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 SS18L1O75177 396 aaPredicted RBP9.23□□□□□ -0.93
COL27A1-204ENST00000477421 KIR2DS2P43631 304 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 RPL11P62913 178 aaKnown RBP9.23□□□□□ -0.93
COL27A1-204ENST00000477421 SRSF4Q08170 494 aaKnown RBP9.23□□□□□ -0.93
COL27A1-204ENST00000477421 NHLRC2Q8NBF2 726 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 SMDT1Q9H4I9 107 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 RRHO14718 337 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 MLNRO43193 412 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 SCGB2A1O75556 95 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 CD40P25942 277 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 HSPE1P61604 102 aaKnown RBP9.23□□□□□ -0.93
COL27A1-204ENST00000477421 LRRC75BQ2VPJ9 315 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 COLCA1Q6ZS62 124 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 MED12LQ86YW9 2145 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 OR1L8Q8NGR8 309 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 NPCDR1Q9BY65 106 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 SIRT7Q9NRC8 400 aa9.23□□□□□ -0.93
COL27A1-204ENST00000477421 C19orf67A6NJJ6 358 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 B4DEV8 164 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 FAM90A26D6RGX4 464 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 CD5P06127 495 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 IER3P46695 156 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 MST1LQ2TV78 715 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 MRPL37Q9BZE1 423 aaKnown RBP9.22□□□□□ -0.93
COL27A1-204ENST00000477421 FKBP11Q9NYL4 201 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 CISD1Q9NZ45 108 aaKnown RBP9.22□□□□□ -0.93
COL27A1-204ENST00000477421 JPT1Q9UK76 154 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 LOC102723971A0A1B0GUV8 181 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 HELTA6NFD8 242 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 PGPEP1LA6NFU8 196 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 J3QW42 95 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 TOMM20LQ6UXN7 152 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 SIGLECL1Q8N7X8 197 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 ZNF383Q8NA42 475 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 FAM122AQ96E09 287 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 MS4A10Q96PG2 267 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 TECRQ9NZ01 308 aaKnown RBP9.22□□□□□ -0.93
COL27A1-204ENST00000477421 TGOLN2O43493 480 aa9.22□□□□□ -0.93
COL27A1-204ENST00000477421 ERVFRD-1P60508 538 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms