RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SERPINE2P07093 398 aa23.24■■□□□ 1.31
HOXB3-208ENST00000476342 CD40LGP29965 261 aa23.24■■□□□ 1.31
HOXB3-208ENST00000476342 TNXAQ16473 311 aa23.24■■□□□ 1.31
HOXB3-208ENST00000476342 OR4A47Q6IF82 309 aa23.24■■□□□ 1.31
HOXB3-208ENST00000476342 C10orf99Q6UWK7 81 aa23.24■■□□□ 1.31
HOXB3-208ENST00000476342 OR4A5Q8NH83 315 aa23.24■■□□□ 1.31
HOXB3-208ENST00000476342 SLC25A21Q9BQT8 299 aaPredicted RBP23.24■■□□□ 1.31
HOXB3-208ENST00000476342 FBXO7Q9Y3I1 522 aa23.24■■□□□ 1.31
HOXB3-208ENST00000476342 WSB1Q9Y6I7 421 aa23.24■■□□□ 1.31
HOXB3-208ENST00000476342 MARCH11A6NNE9 402 aa23.23■■□□□ 1.31
HOXB3-208ENST00000476342 B3GALNT1O75752 331 aa23.23■■□□□ 1.31
HOXB3-208ENST00000476342 ZNF846Q147U1 533 aa23.23■■□□□ 1.31
HOXB3-208ENST00000476342 ECSCRQ19T08 205 aa23.23■■□□□ 1.31
HOXB3-208ENST00000476342 TEX38Q6PEX7 206 aa23.23■■□□□ 1.31
HOXB3-208ENST00000476342 GRPEL2Q8TAA5 225 aa23.23■■□□□ 1.31
HOXB3-208ENST00000476342 FAM103A1Q9BTL3 118 aaKnown RBP23.23■■□□□ 1.31
HOXB3-208ENST00000476342 TEX13DA0A0J9YY54 714 aaPredicted RBP23.22■■□□□ 1.31
HOXB3-208ENST00000476342 LINC00854A0A1B0GVQ3 168 aa23.22■■□□□ 1.31
HOXB3-208ENST00000476342 ARPC1BO15143 372 aaKnown RBP23.22■■□□□ 1.31
HOXB3-208ENST00000476342 RPA2P15927 270 aa23.22■■□□□ 1.31
HOXB3-208ENST00000476342 MRGPRG-AS1Q2M3A8 158 aa23.22■■□□□ 1.31
HOXB3-208ENST00000476342 TMEM140Q9NV12 185 aa23.22■■□□□ 1.31
HOXB3-208ENST00000476342 VSIG4Q9Y279 399 aa23.22■■□□□ 1.31
HOXB3-208ENST00000476342 G3V318 75 aa23.21■■□□□ 1.31
HOXB3-208ENST00000476342 SSBP2P81877 361 aaPredicted RBP23.21■■□□□ 1.31
HOXB3-208ENST00000476342 CFHR3Q02985 330 aa23.21■■□□□ 1.31
HOXB3-208ENST00000476342 TP53RKQ96S44 253 aa23.21■■□□□ 1.31
HOXB3-208ENST00000476342 NAA60Q9H7X0 242 aa23.21■■□□□ 1.31
HOXB3-208ENST00000476342 NUBP2Q9Y5Y2 271 aa23.21■■□□□ 1.31
HOXB3-208ENST00000476342 KRASP01116 189 aa23.2■■□□□ 1.3
HOXB3-208ENST00000476342 OPN1MWP04001 364 aa23.2■■□□□ 1.3
HOXB3-208ENST00000476342 OPN1MW2P0DN77 364 aa23.2■■□□□ 1.3
HOXB3-208ENST00000476342 OPN1MW3P0DN78 364 aa23.2■■□□□ 1.3
HOXB3-208ENST00000476342 EGR2P11161 476 aaPredicted RBP23.2■■□□□ 1.3
HOXB3-208ENST00000476342 MAS1LP35410 378 aa23.2■■□□□ 1.3
HOXB3-208ENST00000476342 AKIRIN2Q53H80 203 aa23.2■■□□□ 1.3
HOXB3-208ENST00000476342 CITED2Q99967 270 aaPredicted RBP23.2■■□□□ 1.3
HOXB3-208ENST00000476342 CRYM-AS1A6NIL9 109 aa23.19■■□□□ 1.3
HOXB3-208ENST00000476342 IGHG4P01861 327 aa23.19■■□□□ 1.3
HOXB3-208ENST00000476342 RPL8P62917 257 aaKnown RBP23.19■■□□□ 1.3
HOXB3-208ENST00000476342 CD83Q01151 205 aa23.19■■□□□ 1.3
HOXB3-208ENST00000476342 RBMS2Q15434 407 aaKnown RBP23.19■■□□□ 1.3
HOXB3-208ENST00000476342 UNQ5815/PRO19632Q6UWF5 114 aa23.19■■□□□ 1.3
HOXB3-208ENST00000476342 LFNGQ8NES3 379 aa23.19■■□□□ 1.3
HOXB3-208ENST00000476342 SRSF12Q8WXF0 261 aaKnown RBP23.19■■□□□ 1.3
HOXB3-208ENST00000476342 PHB2Q99623 299 aa23.19■■□□□ 1.3
HOXB3-208ENST00000476342 ELANEP08246 267 aa23.18■■□□□ 1.3
HOXB3-208ENST00000476342 PPIFP30405 207 aaKnown RBP23.18■■□□□ 1.3
HOXB3-208ENST00000476342 G6PCP35575 357 aa23.18■■□□□ 1.3
HOXB3-208ENST00000476342 FOXE3Q13461 319 aa23.18■■□□□ 1.3
HOXB3-208ENST00000476342 TCTEX1D4Q5JR98 221 aa23.18■■□□□ 1.3
HOXB3-208ENST00000476342 SGPP2Q8IWX5 399 aa23.18■■□□□ 1.3
HOXB3-208ENST00000476342 CADM3Q8N126 398 aa23.18■■□□□ 1.3
HOXB3-208ENST00000476342 TMEM68Q96MH6 324 aa23.18■■□□□ 1.3
HOXB3-208ENST00000476342 TCRBV4S1A1TA0A5B7 111 aa23.17■■□□□ 1.3
HOXB3-208ENST00000476342 M0QZ24 198 aa23.17■■□□□ 1.3
HOXB3-208ENST00000476342 TRIM16LQ309B1 348 aa23.17■■□□□ 1.3
HOXB3-208ENST00000476342 CXorf66Q5JRM2 361 aaPredicted RBP23.17■■□□□ 1.3
HOXB3-208ENST00000476342 KHDC1LQ5JSQ8 128 aa23.17■■□□□ 1.3
HOXB3-208ENST00000476342 NDUFA11Q86Y39 141 aa23.17■■□□□ 1.3
HOXB3-208ENST00000476342 MINDY2Q8NBR6 621 aa23.17■■□□□ 1.3
HOXB3-208ENST00000476342 FOXA2Q9Y261 457 aaPredicted RBP23.17■■□□□ 1.3
HOXB3-208ENST00000476342 TSSC4Q9Y5U2 329 aaPredicted RBP23.17■■□□□ 1.3
HOXB3-208ENST00000476342 A0A1W2PN81 502 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 UPK2O00526 184 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 ATG12O94817 140 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 FGF2P09038 288 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 OR5AC1P0C628 307 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 UCP1P25874 307 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 CHRNA7P36544 502 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 C2orf68Q2NKX9 166 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 C19orf54Q5BKX5 351 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 HIST2H2BDQ6DRA6 164 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 ADAD2Q8NCV1 583 aaKnown RBP23.16■■□□□ 1.3
HOXB3-208ENST00000476342 KCNIP3Q9Y2W7 256 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 IL6RP08887 468 aaPredicted RBP23.16■■□□□ 1.3
HOXB3-208ENST00000476342 AKR1C4P17516 323 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 HLA-GP17693 338 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 CCR6P51684 374 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 SP6Q3SY56 376 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 TMED4Q7Z7H5 227 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 TMEM230Q96A57 120 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 SEC22AQ96IW7 307 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 TSC22D3Q99576 134 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 SPIN2AQ99865 258 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 SPIN2BQ9BPZ2 258 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 TMEM222Q9H0R3 208 aa23.16■■□□□ 1.3
HOXB3-208ENST00000476342 LYRM1O43325 122 aa23.15■■□□□ 1.3
HOXB3-208ENST00000476342 IGKV1-39P01597 117 aa23.15■■□□□ 1.3
HOXB3-208ENST00000476342 IGKV1D-39P04432 117 aa23.15■■□□□ 1.3
HOXB3-208ENST00000476342 RPL27AP46776 148 aaKnown RBP23.15■■□□□ 1.3
HOXB3-208ENST00000476342 DHODHQ02127 395 aa23.15■■□□□ 1.3
HOXB3-208ENST00000476342 OR5M8Q8NGP6 311 aa23.15■■□□□ 1.3
HOXB3-208ENST00000476342 MSGN1A6NI15 193 aa23.14■■□□□ 1.29
HOXB3-208ENST00000476342 IGLV1-40P01703 118 aa23.14■■□□□ 1.29
HOXB3-208ENST00000476342 PSMB8P28062 276 aa23.14■■□□□ 1.29
HOXB3-208ENST00000476342 NSUN5P1Q3KNT7 163 aa23.14■■□□□ 1.29
HOXB3-208ENST00000476342 C10orf55Q5SWW7 151 aa23.14■■□□□ 1.29
HOXB3-208ENST00000476342 TMEM65Q6PI78 240 aa23.14■■□□□ 1.29
HOXB3-208ENST00000476342 H2BFWTQ7Z2G1 175 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms