RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 VKORC1L1Q8N0U8 176 aa8.13□□□□□ -1.11
CDRT1-205ENST00000475944 CACNG8Q8WXS5 425 aa8.13□□□□□ -1.11
CDRT1-205ENST00000475944 LINC00476Q8WZB0 136 aa8.13□□□□□ -1.11
CDRT1-205ENST00000475944 EEF1AKMT3Q96AZ1 226 aa8.13□□□□□ -1.11
CDRT1-205ENST00000475944 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
CDRT1-205ENST00000475944 FYTTD1Q96QD9 318 aaKnown RBP8.13□□□□□ -1.11
CDRT1-205ENST00000475944 OR2A7Q96R45 310 aa8.13□□□□□ -1.11
CDRT1-205ENST00000475944 HSD17B10Q99714 261 aaKnown RBP8.13□□□□□ -1.11
CDRT1-205ENST00000475944 SLC2A9Q9NRM0 540 aa8.13□□□□□ -1.11
CDRT1-205ENST00000475944 RBMX2Q9Y388 322 aaKnown RBP8.13□□□□□ -1.11
CDRT1-205ENST00000475944 ZNF320A2RRD8 509 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 TMEM213A2RRL7 107 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 HLA-DQB1P01920 261 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 IL6RP08887 468 aaPredicted RBP8.12□□□□□ -1.11
CDRT1-205ENST00000475944 ZNF735P0CB33 412 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 HIST1H1BP16401 226 aaKnown RBP8.12□□□□□ -1.11
CDRT1-205ENST00000475944 RAB3BP20337 219 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 NFYAP23511 347 aaPredicted RBP8.12□□□□□ -1.11
CDRT1-205ENST00000475944 RPL30P62888 115 aaKnown RBP8.12□□□□□ -1.11
CDRT1-205ENST00000475944 UXS1Q8NBZ7 420 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 TMEM167AQ8TBQ9 72 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 TCTEX1D2Q8WW35 142 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 FANCD2OSQ96PS1 177 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 OVOL2Q9BRP0 275 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 ST6GALNAC5Q9BVH7 336 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 ATG5Q9H1Y0 275 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 DCSTAMPQ9H295 470 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 MLXQ9UH92 298 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 SPATA2Q9UM82 520 aa8.12□□□□□ -1.11
CDRT1-205ENST00000475944 TRBV7-1A0A0A6YYK4 115 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 CXorf65A6NEN9 183 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 NUPR2A6NF83 97 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 E7EUB6 86 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 SCAF4O95104 1147 aaKnown RBP8.11□□□□□ -1.11
CDRT1-205ENST00000475944 NDUFB8O95169 186 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 LY6G6CO95867 125 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 HRASP01112 189 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 IGHV3-23P01764 117 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 CRYGCP07315 174 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 DEFA4P12838 97 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 CTRB1P17538 263 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 CRHBPP24387 322 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 PSMB6P28072 239 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 AQP4P55087 323 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 TBCEQ15813 527 aaPredicted RBP8.11□□□□□ -1.11
CDRT1-205ENST00000475944 CDNFQ49AH0 187 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 HACD4Q5VWC8 232 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 CTRB2Q6GPI1 263 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 BTNL8Q6UX41 500 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 ZNF66Q6ZN08 573 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 C19orf35Q6ZS72 473 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 ZNF367Q7RTV3 350 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 PUSL1Q8N0Z8 303 aaKnown RBP8.11□□□□□ -1.11
CDRT1-205ENST00000475944 MARC2Q969Z3 335 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 CXorf58Q96LI9 332 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 AIFM2Q9BRQ8 373 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 ELF5Q9UKW6 265 aaPredicted RBP8.11□□□□□ -1.11
CDRT1-205ENST00000475944 S4R3C0 116 aa8.11□□□□□ -1.11
CDRT1-205ENST00000475944 TRAV25A0A0B4J276 109 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 IGKV1D-13A0A0B4J2D9 117 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 SCGNO76038 276 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 IGLV2-14P01704 120 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 IGKV1-13P0DP09 117 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 AREGP15514 252 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 RPL8P62917 257 aaKnown RBP8.1□□□□□ -1.11
CDRT1-205ENST00000475944 PMS2P11Q13670 270 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 KLK9Q2XQG4 91 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 TM4SF20Q53R12 229 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 CNIH2Q6PI25 160 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 RBPMS2Q6ZRY4 209 aaKnown RBP8.1□□□□□ -1.11
CDRT1-205ENST00000475944 SSX9Q7RTT3 188 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 MFSD4AQ8N468 514 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 TAS2R8Q9NYW2 309 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 KLK9Q9UKQ9 250 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 TP53TG1Q9Y2A0 90 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 SELENOKQ9Y6D0 94 aa8.1□□□□□ -1.11
CDRT1-205ENST00000475944 HYDINQ4G0P3 5121 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 IGLV11-55A0A075B6I3 123 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 A0A1B0GW64 132 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 TRDV1A0A1B0GX56 115 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 MFSD2BA6NFX1 497 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 CLEC3BP05452 202 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 HLA-GP17693 338 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 GALP22466 123 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 APOC4P55056 127 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 ELLP55199 621 aaPredicted RBP8.09□□□□□ -1.11
CDRT1-205ENST00000475944 GNG2P59768 71 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 EIF4EBP1Q13541 118 aaPredicted RBP8.09□□□□□ -1.11
CDRT1-205ENST00000475944 WFDC3Q8IUB2 231 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 SLC38A6Q8IZM9 456 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 OR1L6Q8NGR2 347 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 OR4A5Q8NH83 315 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 NUDCD2Q8WVJ2 157 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 NDUFB11Q9NX14 153 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 BET1LQ9NYM9 111 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 THYN1Q9P016 225 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 MRPL27Q9P0M9 148 aaKnown RBP8.09□□□□□ -1.11
CDRT1-205ENST00000475944 ANXA10Q9UJ72 324 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 UFC1Q9Y3C8 167 aa8.09□□□□□ -1.11
CDRT1-205ENST00000475944 ALMS1Q8TCU4 4167 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms