RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ODF3L1Q8IXM7 274 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 OR4C13Q8NGP0 309 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 OR4S2Q8NH73 311 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 CFHR4Q92496 578 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 LSM10Q969L4 123 aaKnown RBP12.49□□□□□ -0.41
CPSF3-203ENST00000475482 GPHA2Q96T91 129 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 AIFM2Q9BRQ8 373 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 NPFFR1Q9GZQ6 430 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 HPRT1P00492 218 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 APOA2P02652 100 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 SLC25A6P12236 298 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 LPAR6P43657 344 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 AKR1C2P52895 323 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 RPL30P62888 115 aaKnown RBP12.48□□□□□ -0.41
CPSF3-203ENST00000475482 LHFPL5Q8TAF8 219 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
CPSF3-203ENST00000475482 C5orf30Q96GV9 206 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 ZNF251Q9BRH9 671 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 ZNF702PQ9H963 129 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 PLEKHA2Q9HB19 425 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 PITPNC1Q9UKF7 332 aa12.48□□□□□ -0.41
CPSF3-203ENST00000475482 LINC00473A8K010 186 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 HTR1DP28221 377 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 ERVK-16P61578 105 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 ZNF585BQ52M93 769 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 TGIF2LXQ8IUE1 241 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 OR2T6Q8NHC8 308 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 THAP6Q8TBB0 222 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 SERTAD4Q9NUC0 356 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 GSKIPQ9P0R6 139 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 DPM3Q9P2X0 92 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 HILPDAQ9Y5L2 63 aa12.47□□□□□ -0.41
CPSF3-203ENST00000475482 A0A1B0GU03 582 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 LY6LH3BQJ8 138 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 BUB1B-PAK6H3BSN5 160 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 KCNAB3O43448 404 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 FCGR3BO75015 233 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 PROP1O75360 226 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 RLN2P04090 185 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 GAPDHP04406 335 aaKnown RBP12.46□□□□□ -0.41
CPSF3-203ENST00000475482 PSMB6P28072 239 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 MC5RP33032 325 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 ARHGDIBP52566 201 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 ZNF816Q0VGE8 651 aaPredicted RBP12.46□□□□□ -0.41
CPSF3-203ENST00000475482 SMCO1Q147U7 214 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 UTF1Q5T230 341 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 ZBTB8BQ8NAP8 495 aaPredicted RBP12.46□□□□□ -0.41
CPSF3-203ENST00000475482 PPP1R1CQ8WVI7 109 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 DDB2Q92466 427 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 ST6GALNAC6Q969X2 333 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 OR10C1Q96KK4 312 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 CACFD1Q9UGQ2 172 aa12.46□□□□□ -0.41
CPSF3-203ENST00000475482 LEUTXA8MZ59 168 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 TSPAN15O95858 294 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 HRASP01112 189 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 C4BPBP20851 252 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 NMSQ5H8A3 153 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 OR2B11Q5JQS5 317 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 TMEM219Q86XT9 240 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 DRAXINQ8NBI3 349 aaPredicted RBP12.45□□□□□ -0.42
CPSF3-203ENST00000475482 RPEQ96AT9 228 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 WNT10AQ9GZT5 417 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 SLC35D1Q9NTN3 355 aa12.45□□□□□ -0.42
CPSF3-203ENST00000475482 FAM90A9PA6NNJ1 464 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 OOSP1A8MZH6 123 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 RAMP3O60896 148 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 S1PR2O95136 353 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 CT45A6P0DMU7 189 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 CT45A5P0DMU8 189 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 CT45A7P0DMV0 189 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 NQO2P16083 231 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 H2BFWTQ7Z2G1 175 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 PDPNQ86YL7 162 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 KLHDC1Q8N7A1 406 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 COA4Q9NYJ1 87 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 PLXNB1O43157 2135 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 NOTCH3Q9UM47 2321 aa12.44□□□□□ -0.42
CPSF3-203ENST00000475482 HMSDA8MTL9 139 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 MPTX1A8MV57 137 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 SMLR1H3BR10 107 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 ST8SIA3O43173 380 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 MPC2O95563 127 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 KRASP01116 189 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 SLC25A4P12235 298 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 NUP62P37198 522 aaPredicted RBP12.43□□□□□ -0.42
CPSF3-203ENST00000475482 BLCAPP62952 87 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 HABP2Q14520 560 aaPredicted RBP12.43□□□□□ -0.42
CPSF3-203ENST00000475482 CCDC144NLQ6NUI1 221 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 C11orf87Q6NUJ2 197 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 Q6ZS46 218 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 C16orf82Q7Z2V1 217 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 ZNF383Q8NA42 475 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 DMBX1Q8NFW5 382 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 OR5AN1Q8NGI8 311 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 OR1S1Q8NH92 325 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 OSR1Q8TAX0 266 aaPredicted RBP12.43□□□□□ -0.42
CPSF3-203ENST00000475482 R3HDM4Q96D70 268 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 NABP2Q9BQ15 211 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 MRPL20Q9BYC9 149 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms