RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-215	ENST00000475319	CD226	Q15762	336 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CCL14	Q16627	93 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	RPEL1	Q2QD12	228 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TTC32	Q5I0X7	151 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	FAM69B	Q5VUD6	431 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TRIM40	Q6P9F5	258 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OOSP2	Q86WS3	158 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TMEM219	Q86XT9	240 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	SFTPA1	Q8IWL2	248 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	RYBP	Q8N488	228 aa	Predicted RBP	4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TMEM178A	Q8NBL3	297 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR1L4	Q8NGR5	311 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CRYGN	Q8WXF5	182 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	VGLL1	Q99990	258 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	PARP12	Q9H0J9	701 aa	Known RBP	4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	DLL3	Q9NYJ7	618 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ST6GALNAC2	Q9UJ37	374 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	HIGD1A	Q9Y241	93 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	INSL5	Q9Y5Q6	135 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TSC2	P49815	1807 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CUL9	Q8IWT3	2517 aa		4.99	□□□□□ -1.61
ECHDC1-215	ENST00000475319	C1orf226	A1L170	272 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	SH2D1B	O14796	132 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	NDUFS4	O43181	175 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	HSBP1	O75506	76 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	NKX2-2	O95096	273 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CA2	P00918	260 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	MT-ATP8	P03928	68 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CSN3	P07498	182 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CD55	P08174	381 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	RPL7	P18124	248 aa	Known RBP	4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ZFP36	P26651	326 aa	Known RBP	4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ZNF415	Q09FC8	603 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319		Q499Y3	187 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	MEIG1	Q5JSS6	88 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	GLB1L	Q6UWU2	654 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	RFLNA	Q6ZTI6	216 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ZNF584	Q8IVC4	421 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	LINC01465	Q8N7H1	131 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR10G7	Q8NGN6	311 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OCC1	Q8TAD7	63 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR5P3	Q8WZ94	311 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	PIGC	Q92535	297 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	BAD	Q92934	168 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	C8orf44	Q96CB5	159 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	MSI2	Q96DH6	328 aa	Known RBP	4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	SNRNP40	Q96DI7	357 aa	Known RBP	4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	SMIM7	Q9BQ49	75 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CISH	Q9NSE2	258 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	HRASLS2	Q9NWW9	162 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	MDFIC	Q9P1T7	246 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	POLR1D	Q9Y2S0	133 aa		4.98	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TRAV18	A0A075B6X5	111 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TINCR	A0A1B0GVN0	87 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	KRTAP23-1	A1A580	65 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CEACAM18	A8MTB9	384 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ZNF732	B4DXR9	585 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	NPIPB11	E5RHQ5	1161 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TNFSF11	O14788	317 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	NBR2	O15453	112 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	PRKN	O60260	465 aa	Predicted RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR2H2	O95918	312 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	GYPA	P02724	150 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CA3	P07451	260 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ATP1B2	P14415	290 aa	Predicted RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	AQP1	P29972	269 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	VDAC2	P45880	294 aa	Predicted RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	NOV	P48745	357 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	RPL23	P62829	140 aa	Known RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CCL20	P78556	96 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	GAGE2B	Q13066	116 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CDO1	Q16878	200 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	GAGE2E	Q4V326	116 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	DCAF12	Q5T6F0	453 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	FAM219B	Q5XKK7	198 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	PMS2CL	Q68D20	193 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR2L13	Q8N349	312 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR5D14	Q8NGL3	314 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR6K6	Q8NGW6	343 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	SCGB1C1	Q8TD33	95 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ACER1	Q8TDN7	264 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TMEM101	Q96IK0	257 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ADO	Q96SZ5	270 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	PRADC1	Q9BSG0	188 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	DKK2	Q9UBU2	259 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	GAGE2D	Q9UEU5	116 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	EVPL	Q92817	2033 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	LOC102723996	A0A087X1L8	192 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	LOC102725191	A0A1B0GVB3	256 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319		A0A1W2PPI3	338 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR4C46	A6NHA9	309 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	FAM90A26	D6RGX4	464 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CLDN5	O00501	218 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	FFAR1	O14842	300 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ZG16	O60844	167 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TBL1X	O60907	577 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ZNF737	O75373	536 aa		4.97	□□□□□ -1.61

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