RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 EGR1P18146 543 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 GPR82Q96P67 336 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 PSMB11A5LHX3 300 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 NPPCP23582 126 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 RAX2Q96IS3 184 aa9.36□□□□□ -0.91
VAPB-204ENST00000475243 IGHV3OR16-8A0A075B7F1 116 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 RAMP1O60894 148 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 ACACAQ13085 2346 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 A0A1W2PRX2 142 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 IL4P05112 153 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 PTGDSP41222 190 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 TUBA4BQ9H853 241 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 M0QZK8 103 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 GGCTO75223 188 aaKnown RBP9.35□□□□□ -0.91
VAPB-204ENST00000475243 NRIP2Q9BQI9 281 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 LEPROTL1O95214 131 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 HIST1H1AQ02539 215 aaPredicted RBP9.35□□□□□ -0.91
VAPB-204ENST00000475243 GCSAMLQ5JQS6 135 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 SFXN3Q9BWM7 321 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 ALX4Q9H161 411 aaPredicted RBP9.35□□□□□ -0.91
VAPB-204ENST00000475243 ZNF256Q9Y2P7 627 aaPredicted RBP9.35□□□□□ -0.91
VAPB-204ENST00000475243 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 FHITP49789 147 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 MUC21Q5SSG8 566 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 EEF1AKMT3Q96AZ1 226 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 PKIBQ9C010 78 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 G6PC2Q9NQR9 355 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 IGKV1D-42A0A075B6H8 117 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 GREM1O60565 184 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 C8orf88P0DMB2 117 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 SMIM10L1P0DMW3 83 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 PSG9Q00887 426 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 SMIM10Q96HG1 83 aa9.35□□□□□ -0.91
VAPB-204ENST00000475243 A0A0B4J293 547 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 ZNF660Q6AZW8 331 aaPredicted RBP9.34□□□□□ -0.91
VAPB-204ENST00000475243 SLC25A38Q96DW6 304 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 BEX4Q9NWD9 120 aaPredicted RBP9.34□□□□□ -0.91
VAPB-204ENST00000475243 PIN1P1O15428 100 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 TRGV3P03979 118 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 MEIG1Q5JSS6 88 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 DRAM1Q8N682 238 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 APCDD1LQ8NCL9 501 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 OR9G1Q8NH87 305 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 SSBP3Q9BWW4 388 aaPredicted RBP9.34□□□□□ -0.91
VAPB-204ENST00000475243 ARFGEF3Q5TH69 2177 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 LTBP4Q8N2S1 1624 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 SBF1O95248 1867 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 TCF20Q9UGU0 1960 aaKnown RBP9.34□□□□□ -0.91
VAPB-204ENST00000475243 DNM1P46Q6ZS02 220 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 ROS1P08922 2347 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 SMIM6P0DI80 62 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 SNRPD3P62318 126 aaKnown RBP9.34□□□□□ -0.91
VAPB-204ENST00000475243 PCNX1Q96RV3 2341 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
VAPB-204ENST00000475243 FAM159AQ6UWV7 190 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 GALNT14Q96FL9 552 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 Q96M66 194 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
VAPB-204ENST00000475243 TCF19Q9Y242 345 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 TMEM238LA0A1B0GVL6 79 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 A6NJY4 79 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 PROB1E7EW31 1015 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 ASPHD2Q6ICH7 369 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 SPSB2Q99619 263 aa9.34□□□□□ -0.91
VAPB-204ENST00000475243 REPIN1Q9BWE0 567 aaKnown RBP9.34□□□□□ -0.91
VAPB-204ENST00000475243 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 SRIP30626 198 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 MARVELD3Q96A59 401 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 SCARF2Q96GP6 870 aaPredicted RBP9.33□□□□□ -0.92
VAPB-204ENST00000475243 A0A0G2JMM0 328 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 A0A1W2PPB8 328 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 A0A1W2PRS3 328 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 KIR3DP1A8MWS1 328 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 AGAP20933 346 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 APOBEC3AP31941 199 aaPredicted RBP9.33□□□□□ -0.92
VAPB-204ENST00000475243 EMP1P54849 157 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 KLRB1Q12918 225 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 BIVMQ86UB2 503 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 PARLQ9H300 379 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.33□□□□□ -0.922e-8■■■■■ 32.4
VAPB-204ENST00000475243 C7orf66A4D0T2 115 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 NPIPB11E5RHQ5 1161 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 CFDP00746 253 aaPredicted RBP9.33□□□□□ -0.92
VAPB-204ENST00000475243 CD1AP06126 327 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 H2BFSP57053 126 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 BSPH1Q075Z2 132 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 RIPPLY2Q5TAB7 128 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 TRAV30A0A087WSZ9 112 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 COX6CP09669 75 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 C1QL2Q7Z5L3 287 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 PTPRDP23468 1912 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 IFNL4K9M1U5 179 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 RRHO14718 337 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 ICAM4Q14773 271 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 OR13C6PQ8NH95 151 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 ITLN2Q8WWU7 325 aaPredicted RBP9.33□□□□□ -0.92
VAPB-204ENST00000475243 SPSB4Q96A44 273 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms