RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 HCP5Q6MZN7 132 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 RPL22L1Q6P5R6 122 aaKnown RBP9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 PNKDQ8N490 385 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 CNIH3Q8TBE1 160 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 PHYHIPLQ96FC7 376 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 PDCD1LG2Q9BQ51 273 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 BARHL1Q9BZE3 327 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 MAGT1Q9H0U3 335 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 PLEKHA2Q9HB19 425 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 AURKAIP1Q9NWT8 199 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 EXOSC1Q9Y3B2 195 aaKnown RBP9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 TPRKBQ9Y3C4 175 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 A0A1W2PPE3 182 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 CLPSL1A2RUU4 121 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 IFITM10A6NMD0 228 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 SH2D1BO14796 132 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 CLIC3O95833 236 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 PMP2P02689 132 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZNF728P0DKX0 622 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 LGALS4P56470 323 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 CKS1BP61024 79 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 CDK5R1Q15078 307 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 KISS1Q15726 138 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 FAM131AQ6UXB0 335 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 RBPMS2Q6ZRY4 209 aaKnown RBP9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR11H4Q8NGC9 324 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 KCNG3Q8TAE7 436 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 GPR148Q8TDV2 347 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 PINX1Q96BK5 328 aaKnown RBP9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZNF714Q96N38 554 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 EXOSC4Q9NPD3 245 aaKnown RBP9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 MGST3O14880 152 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 SIVA1O15304 175 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 PET100P0DJ07 73 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 COX7A1P24310 79 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 MFAP4P55083 255 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 DLX6P56179 175 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 RPS27AP62979 156 aaKnown RBP9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 RHOGP84095 191 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 RELBQ01201 579 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 EDDM3AQ14507 147 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 OLFML2AQ68BL7 652 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 JAGN1Q8N5M9 183 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 CHST4Q8NCG5 386 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZNF738Q8NE65 137 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR4S1Q8NGB4 309 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR1L6Q8NGR2 347 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 SPACA5Q96QH8 159 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 MEGF9Q9H1U4 602 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 IL36RNQ9UBH0 155 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 COMMD3Q9UBI1 195 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 ST3GAL6Q9Y274 331 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 LINC00312Q9Y6C7 94 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 V9GYH0 126 aa9.35□□□□□ -0.91
HLA-DOB-208ENST00000475235 IGKV1-12A0A0C4DH73 117 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 SLC17A3O00476 420 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 PHOX2AO14813 284 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 AIREO43918 545 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 PSPNO60542 156 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 IGKV1D-12P01611 117 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 UBBP0CG47 229 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 TMEM225BP0DP42 221 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 LMO1P25800 156 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 DUSP1P28562 367 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 TNFSF8P32971 234 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 LRRC75BQ2VPJ9 315 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 PRR31Q5SQ13 230 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 ASCL4Q6XD76 172 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR2W3Q7Z3T1 314 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 HIST3H2BBQ8N257 126 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR52B4Q8NGK2 314 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 RPS4Y2Q8TD47 263 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 FBLIM1Q8WUP2 373 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 SMIM19Q96E16 107 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 SLC35E1Q96K37 410 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 CHST6Q9GZX3 395 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 RAB18Q9NP72 206 aa9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 CNOT2Q9NZN8 540 aaKnown RBP9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZNF230Q9UIE0 474 aaPredicted RBP9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 TSSC4Q9Y5U2 329 aaPredicted RBP9.34□□□□□ -0.91
HLA-DOB-208ENST00000475235 DOCK11Q5JSL3 2073 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 H3BUX3 64 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 SIRPB1O00241 398 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 PDE6DO43924 150 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR2H2O95918 312 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 SULT1A3P0DMM9 295 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 SULT1A4P0DMN0 295 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 IGHV1-8P0DP01 117 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 SOX2P48431 317 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 MTNR1BP49286 362 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 BAXQ07812 192 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR11H6Q8NGC7 330 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 MRAPQ8TCY5 172 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 TMEM106AQ96A25 262 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 ISOC2Q96AB3 205 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 MRAP2Q96G30 205 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 GPER1Q99527 375 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 FAAP24Q9BTP7 215 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 PBDC1Q9BVG4 233 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms