RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 FAAP20Q6NZ36 180 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 CCDC190Q86UF4 302 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 TERB2Q8NHR7 220 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 CASTOR1Q8WTX7 329 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 SRSF12Q8WXF0 261 aaKnown RBP12.63□□□□□ -0.39
SRM-204ENST00000475189 UBE2E2Q96LR5 201 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 TMEM68Q96MH6 324 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 AIFM2Q9BRQ8 373 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 PLEKHA2Q9HB19 425 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 V9GYH0 126 aa12.63□□□□□ -0.39
SRM-204ENST00000475189 ANKRD20A5PA0PJZ0 165 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 IL6RP08887 468 aaPredicted RBP12.62□□□□□ -0.39
SRM-204ENST00000475189 AKAIN1P0CW23 69 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 PGAM2P15259 253 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 NQO2P16083 231 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 MYCNOSP40205 109 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 LPAR6P43657 344 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 MEF2DQ14814 521 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 SCGB2B2Q4G0G5 96 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 ZNF585BQ52M93 769 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 C10orf55Q5SWW7 151 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 OR4A47Q6IF82 309 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 TBC1D26Q86UD7 250 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 OR5T1Q8NG75 326 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 OR4C16Q8NGL9 310 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 C4orf3Q8WVX3 66 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 RAX2Q96IS3 184 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 BET1LQ9NYM9 111 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 COMMD9Q9P000 198 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 VSIG4Q9Y279 399 aa12.62□□□□□ -0.39
SRM-204ENST00000475189 ACTL6BO94805 426 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 S100GP29377 79 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 MAS1LP35410 378 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 PPP5CP53041 499 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 RND3P61587 244 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 ZNF79Q15937 498 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 DEFB136Q30KP8 78 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 MRPL41Q8IXM3 137 aaKnown RBP12.61□□□□□ -0.39
SRM-204ENST00000475189 LINC00482Q8N8I6 264 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 OR4A5Q8NH83 315 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 MRGPRFQ96AM1 343 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 ZNF486Q96H40 463 aaPredicted RBP12.61□□□□□ -0.39
SRM-204ENST00000475189 MS4A10Q96PG2 267 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 DUX3Q96PT4 197 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 P2RX4Q99571 388 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 PHB2Q99623 299 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 THAP7Q9BT49 309 aaPredicted RBP12.61□□□□□ -0.39
SRM-204ENST00000475189 GNB4Q9HAV0 340 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 SLC2A9Q9NRM0 540 aa12.61□□□□□ -0.39
SRM-204ENST00000475189 DISC1C4P0D8 188 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 I3L521 148 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 CCL24O00175 119 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 WIPF1O43516 503 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 APELAP0DMC3 54 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 PI3P19957 117 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 CD33P20138 364 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 PTBP1P26599 531 aaKnown RBP eCLIP12.6□□□□□ -0.39
SRM-204ENST00000475189 PYDC2Q56P42 97 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 OR6Q1Q8NGQ2 317 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 MARCH1Q8TCQ1 289 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 SLA2Q9H6Q3 261 aa12.6□□□□□ -0.39
SRM-204ENST00000475189 FAM212BQ9NTI7 297 aaPredicted RBP12.6□□□□□ -0.39
SRM-204ENST00000475189 TRAV3A0A0B4J244 114 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 TEX22C9J3V5 150 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 E7EUB6 86 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 G3V4G9 280 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 H3BUA1 57 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 UPK2O00526 184 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 MPPED1O15442 326 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 TRGV3P03979 118 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 MYOD1P15172 320 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 RPA2P15927 270 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 CD40LGP29965 261 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 ETV6P41212 452 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 RPL27AP46776 148 aaKnown RBP12.59□□□□□ -0.39
SRM-204ENST00000475189 TPPP2P59282 170 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 RPL8P62917 257 aaKnown RBP12.59□□□□□ -0.39
SRM-204ENST00000475189 RUNX1Q01196 453 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 SAMD5Q5TGI4 173 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 Q8N402 240 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 DMBX1Q8NFW5 382 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 OR13C8Q8NGS7 320 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 ZFAND1Q8TCF1 268 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 OR5B12Q96R08 314 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 SPIN2AQ99865 258 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 SPIN2BQ9BPZ2 258 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 HRASLSQ9HDD0 168 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 ZNF355PQ9NSJ1 428 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 TMEM140Q9NV12 185 aa12.59□□□□□ -0.39
SRM-204ENST00000475189 A0A1B0GW64 132 aa12.58□□□□□ -0.4
SRM-204ENST00000475189 HMX3A6NHT5 357 aa12.58□□□□□ -0.4
SRM-204ENST00000475189 MARCH11A6NNE9 402 aa12.58□□□□□ -0.4
SRM-204ENST00000475189 BRI3O95415 125 aa12.58□□□□□ -0.4
SRM-204ENST00000475189 OR9G9P0C7N8 305 aa12.58□□□□□ -0.4
SRM-204ENST00000475189 HLA-GP17693 338 aa12.58□□□□□ -0.4
SRM-204ENST00000475189 PIGPP57054 158 aa12.58□□□□□ -0.4
SRM-204ENST00000475189 ERVK-16P61578 105 aa12.58□□□□□ -0.4
SRM-204ENST00000475189 OXLD1Q5BKU9 147 aa12.58□□□□□ -0.4
SRM-204ENST00000475189 C1QL4Q86Z23 238 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms