RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 Q6ZRG5 221 aa4.04□□□□□ -1.76
NPHP3-206ENST00000474871 COMMD6Q7Z4G1 85 aa4.04□□□□□ -1.76
NPHP3-206ENST00000474871 MARCH9Q86YJ5 346 aa4.04□□□□□ -1.76
NPHP3-206ENST00000474871 OR4B1Q8NGF8 309 aa4.04□□□□□ -1.76
NPHP3-206ENST00000474871 ZPLD1Q8TCW7 415 aa4.04□□□□□ -1.76
NPHP3-206ENST00000474871 NSUN5Q96P11 429 aaKnown RBP4.04□□□□□ -1.76
NPHP3-206ENST00000474871 C20orf78Q9BR46 151 aa4.04□□□□□ -1.76
NPHP3-206ENST00000474871 ACER3Q9NUN7 267 aa4.04□□□□□ -1.76
NPHP3-206ENST00000474871 PRNDQ9UKY0 176 aa4.04□□□□□ -1.76
NPHP3-206ENST00000474871 KIAA1549Q9HCM3 1950 aa4.04□□□□□ -1.76
NPHP3-206ENST00000474871 BORCS7-ASMTA0A0B4J1R7 106 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 DCDC2BA2VCK2 349 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 SRRM4A7MD48 611 aaKnown RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 SPINK8P0C7L1 97 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 WT1P19544 449 aaPredicted RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ZNF415Q09FC8 603 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 SPEM2Q0P670 501 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 KLRD1Q13241 179 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 DEFB109BQ30KR1 87 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 FHL5Q5TD97 284 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 GTF2H5Q6ZYL4 71 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 LHFPL1Q86WI0 220 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 C1orf158Q8N1D5 194 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 OR51T1Q8NGJ9 327 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 IL22RA2Q969J5 263 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 FOXQ1Q9C009 403 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 IER3IP1Q9Y5U9 82 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 R4GN57 208 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 XIRP2A4UGR9 3374 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 REV3LO60673 3130 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 BRWD1Q9NSI6 2320 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 hADV38S2A0JD32 116 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 LILRA5A6NI73 299 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 FNDC10F2Z333 226 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 DANCRP0C864 163 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 PRDX3P30048 256 aaKnown RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 CX3CL1P78423 397 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 TRIP6Q15654 476 aaKnown RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ANXA2RQ3ZCQ2 193 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ZNF385BQ569K4 471 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 DMRTC1Q5HYR2 192 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 HSD11B1LQ7Z5J1 315 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ZNF584Q8IVC4 421 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 SUMF1Q8NBK3 374 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 APCDD1LQ8NCL9 501 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 OR13H1Q8NG92 308 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 TMEM18Q96B42 140 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 SLC25A44Q96H78 314 aaPredicted RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 OR4C12Q96R67 309 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ADOQ96SZ5 270 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 RPRMQ9NS64 109 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 MTFP1Q9UDX5 166 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 PCTPQ9UKL6 214 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 RALYQ9UKM9 306 aaKnown RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 PKIGQ9Y2B9 76 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 DNAJC15Q9Y5T4 150 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 TRANK1O15050 2925 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 A0A1B0GTL3 188 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 EPOPA6NHQ4 379 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 C2CD4DB7Z1M9 353 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 CLDN14O95500 239 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 IGHMP01871 453 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 HIST1H3AP68431 136 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 SLC25A35Q3KQZ1 300 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ZNF684Q5T5D7 378 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 STUMQ69YW2 141 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 SBSNQ6UWP8 590 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 CMTM4Q8IZR5 234 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 BORCS7Q96B45 105 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 MACROD1Q9BQ69 325 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 CYSTM1Q9H1C7 97 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 KCNJ16Q9NPI9 418 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 C20orf141Q9NUB4 165 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 IGLV3-16A0A075B6K0 115 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 OTOL1A6NHN0 477 aaPredicted RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 OR7C1O76099 320 aaPredicted RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ORM2P19652 201 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 PPP1R1AQ13522 171 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ACOT6Q3I5F7 207 aaPredicted RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 MPV17L2Q567V2 206 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 RFLNAQ6ZTI6 216 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 PPP1R27Q86WC6 154 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 KIR2DL4Q99706 377 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 GGTLC1Q9BX51 225 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 EDA2RQ9HAV5 297 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ANXA10Q9UJ72 324 aa4.03□□□□□ -1.76
NPHP3-206ENST00000474871 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.03□□□□□ -1.76
NPHP3-206ENST00000474871 EP300Q09472 2414 aaPredicted RBP4.02□□□□□ -1.77
NPHP3-206ENST00000474871 CDC42EP2O14613 210 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 SOCS1O15524 211 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 HSBP1O75506 76 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 RBP4P02753 201 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 SCTP09683 121 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 FAM106CPP0CH98 169 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 CT45A10P0DMU9 189 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 PIPP12273 146 aaPredicted RBP4.02□□□□□ -1.77
NPHP3-206ENST00000474871 SRP14P37108 136 aaKnown RBP4.02□□□□□ -1.77
NPHP3-206ENST00000474871 OR1D4P47884 311 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 FAM106AQ4KMX7 169 aa4.02□□□□□ -1.77
NPHP3-206ENST00000474871 C2orf91Q6ZV80 131 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms