RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 MBD2Q9UBB5 411 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 METTL1Q9UBP6 276 aaKnown RBP8.32□□□□□ -1.08
COL12A1-206ENST00000474564 POMT1Q9Y6A1 747 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 FBN2P35556 2912 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 CELSR2Q9HCU4 2923 aa8.32□□□□□ -1.08
COL12A1-206ENST00000474564 CRYBG3Q68DQ2 2970 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 FAM90A26D6RGX4 464 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 H3BUX3 64 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 RRHO14718 337 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 ST8SIA3O43173 380 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 SLC25A17O43808 307 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 KBTBD11O94819 623 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 OR2F2O95006 317 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 NXPH3O95157 252 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 MPC2O95563 127 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 IFNA17P01571 189 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 FGF2P09038 288 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 NKX2-1P43699 371 aaPredicted RBP8.31□□□□□ -1.08
COL12A1-206ENST00000474564 F2RL1P55085 397 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 RPL8P62917 257 aaKnown RBP8.31□□□□□ -1.08
COL12A1-206ENST00000474564 RPP30P78346 268 aaKnown RBP8.31□□□□□ -1.08
COL12A1-206ENST00000474564 RAB32Q13637 225 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 PSG5Q15238 335 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 LDLRAD2Q5SZI1 272 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 OR4A47Q6IF82 309 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 Q6YL49 198 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 PPP1R27Q86WC6 154 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 DYNAPQ8N1N2 210 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 TMEM86BQ8N661 226 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 NPBQ8NG41 125 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 LHFPL5Q8TAF8 219 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 C17orf50Q8WW18 174 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 SLC25A33Q9BSK2 321 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 CACNG5Q9UF02 275 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 MOB4Q9Y3A3 225 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 APCP25054 2843 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 ABCA12Q86UK0 2595 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 ARHGAP32A7KAX9 2087 aa8.31□□□□□ -1.08
COL12A1-206ENST00000474564 CR1P17927 2039 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 UNC79Q9P2D8 2635 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 HECTD1Q9ULT8 2610 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 A0A0D9SG52 128 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 MPTX1A8MV57 137 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 UPK2O00526 184 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 CRYBA1P05813 215 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 CD24P25063 80 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 IER3P46695 156 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 BRWD1-AS2P59051 145 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 KRTAP1-1Q07627 177 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 SRSF4Q08170 494 aaKnown RBP8.3□□□□□ -1.08
COL12A1-206ENST00000474564 ARSJQ5FYB0 599 aaPredicted RBP8.3□□□□□ -1.08
COL12A1-206ENST00000474564 PRSS54Q6PEW0 395 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 IL17RELQ6ZVW7 336 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 VKORC1L1Q8N0U8 176 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 BCL6BQ8N143 479 aaPredicted RBP8.3□□□□□ -1.08
COL12A1-206ENST00000474564 OR5B3Q8NH48 314 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 TMEM167AQ8TBQ9 72 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 GPR146Q96CH1 333 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 AJUBAQ96IF1 538 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 RBM14Q96PK6 669 aaKnown RBP8.3□□□□□ -1.08
COL12A1-206ENST00000474564 CIB3Q96Q77 187 aaPredicted RBP8.3□□□□□ -1.08
COL12A1-206ENST00000474564 ARL6Q9H0F7 186 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 HIPK2Q9H2X6 1198 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 TCF19Q9Y242 345 aa8.3□□□□□ -1.08
COL12A1-206ENST00000474564 RCL1Q9Y2P8 373 aaKnown RBP8.3□□□□□ -1.08
COL12A1-206ENST00000474564 A0A1W2PN81 502 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 HMSDA8MTL9 139 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 CEBPZOSA8MTT3 80 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 CYB5BO43169 146 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 FGF16O43320 207 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 GPR137BO60478 399 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 IGKV1-39P01597 117 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 IGKV1-5P01602 117 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 IGKV1D-39P04432 117 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 SAA1P0DJI8 122 aaPredicted RBP8.29□□□□□ -1.08
COL12A1-206ENST00000474564 SLC25A4P12235 298 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 CHRNA7P36544 502 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 SPCS3P61009 180 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 TNXAQ16473 311 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 LY6EQ16553 131 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 C5orf64Q2M2E5 130 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 Q5BKY6 102 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 NMSQ5H8A3 153 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 HSD17B13Q7Z5P4 300 aaPredicted RBP8.29□□□□□ -1.08
COL12A1-206ENST00000474564 PUSL1Q8N0Z8 303 aaKnown RBP8.29□□□□□ -1.08
COL12A1-206ENST00000474564 C9orf62Q8N4C0 152 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 OR1L8Q8NGR8 309 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 OR52E5Q8NH55 327 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 ABHD5Q8WTS1 349 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 SMR3AQ99954 134 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 HINT2Q9BX68 163 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 FBXL15Q9H469 300 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 PRDM13Q9H4Q3 707 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 SLA2Q9H6Q3 261 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 VPREB3Q9UKI3 123 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 ZNF257Q9Y2Q1 563 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 SIGLEC9Q9Y336 463 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 OR51B2Q9Y5P1 312 aa8.29□□□□□ -1.08
COL12A1-206ENST00000474564 POLQO75417 2590 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 TRAV14DV4A0A0A6YYC5 116 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms