RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, human

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFCD-204	ENST00000474543	SMG1	Q96Q15	3661 aa	Known RBP	11.97	□□□□□ -0.49
NELFCD-204	ENST00000474543	PRRC2C	Q9Y520	2896 aa	Known RBP	11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543		A0A1B0GV90	55 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	IFNL4	K9M1U5	179 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	TMPRSS2	O15393	492 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	PDE6D	O43924	150 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	PROP1	O75360	226 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	AGFG2	O95081	481 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	GCG	P01275	180 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	BMP5	P22003	454 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	UBE2G2	P60604	165 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	KCNIP4	Q6PIL6	250 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	ZNF664	Q8N3J9	261 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	RAB1C	Q92928	201 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543	BSN	Q9UPA5	3926 aa		11.96	□□□□□ -0.49
NELFCD-204	ENST00000474543		A8MWP6	167 aa		11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	C15orf65	H3BRN8	121 aa		11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	EDDM3B	P56851	147 aa		11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	LCN2	P80188	198 aa		11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	KLRB1	Q12918	225 aa		11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	AARD	Q4LEZ3	155 aa		11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	FAM78B	Q5VT40	261 aa		11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543		Q6ZT83	130 aa		11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	DERL1	Q9BUN8	251 aa		11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	TET2	Q6N021	2002 aa	Predicted RBP	11.96	□□□□□ -0.5
NELFCD-204	ENST00000474543	NDUFB4	O95168	129 aa		11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	IGKV3-15	P01624	115 aa		11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	PRB1	P04280	392 aa		11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	CD99	P14209	185 aa		11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	IL3RA	P26951	378 aa		11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	DUT	P33316	252 aa	Known RBP	11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	HTD2	P86397	168 aa		11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	CST9LP1	Q5W188	147 aa		11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	KCNIP2	Q9NS61	270 aa		11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	CLCF1	Q9UBD9	225 aa		11.95	□□□□□ -0.5
NELFCD-204	ENST00000474543	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	SPINT2	O43291	252 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	TIMM8A	O60220	97 aa	Predicted RBP	11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	ADH4	P08319	380 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	RPL15	P61313	204 aa	Known RBP	11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	LTC4S	Q16873	150 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	SMIM21	Q3B7S5	101 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	FAM214B	Q7L5A3	538 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	TMEM144	Q7Z5S9	345 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	CD177	Q8N6Q3	437 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	PATZ1	Q9HBE1	687 aa	Known RBP	11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	MSL2	Q9HCI7	577 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	FZR1	Q9UM11	496 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543		A0A1W2PPV4	95 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	FCGR3B	O75015	233 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	GPR12	P47775	334 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	TNFSF10	P50591	281 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	CNN1	P51911	297 aa	Known RBP	11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	TREML4	Q6UXN2	200 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	ZNF114	Q8NC26	417 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	TMEM18	Q96B42	140 aa		11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	NOL4L	Q96MY1	436 aa	Predicted RBP	11.94	□□□□□ -0.5
NELFCD-204	ENST00000474543	PGPEP1L	A6NFU8	196 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	FAM90A9P	A6NNJ1	464 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543		F6UZH7	168 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	RRH	O14718	337 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	MPDU1	O75352	247 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	HPRT1	P00492	218 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	KITLG	P21583	273 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	OPRK1	P41145	380 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	FABP6	P51161	128 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	SPCS3	P61009	180 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	SST	P61278	116 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543		Q6ZS92	163 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	TMEM178A	Q8NBL3	297 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543		Q8TCH9	128 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	PLPPR2	Q96GM1	343 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	TRIB1	Q96RU8	372 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	CFAP46	Q8IYW2	2715 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	HEATR1	Q9H583	2144 aa	Known RBP	11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	TRAV17	A0A0B4J275	112 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543		A0A0U1RQK1	487 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	ZNF320	A2RRD8	509 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	SLC31A2	O15432	143 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	SOX15	O60248	233 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	RNF224	P0DH78	156 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	VDAC2	P45880	294 aa	Predicted RBP	11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	PAX5	Q02548	391 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	FOXL1	Q12952	345 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	EDDM3A	Q14507	147 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	GUSBP1	Q15486	140 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	PRAMEF5	Q5TYX0	476 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	TRAT1	Q6PIZ9	186 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	GBGT1	Q8N5D6	347 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	OR4A16	Q8NH70	328 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	IMMP2L	Q96T52	175 aa		11.93	□□□□□ -0.5
NELFCD-204	ENST00000474543	PRSS46	E5RG02	174 aa		11.92	□□□□□ -0.5
NELFCD-204	ENST00000474543	ARL14EPL	P0DKL9	152 aa		11.92	□□□□□ -0.5
NELFCD-204	ENST00000474543	PRDX2	P32119	198 aa		11.92	□□□□□ -0.5
NELFCD-204	ENST00000474543	RPP30	P78346	268 aa	Known RBP	11.92	□□□□□ -0.5
NELFCD-204	ENST00000474543	MORN2	Q502X0	79 aa		11.92	□□□□□ -0.5
NELFCD-204	ENST00000474543	VKORC1L1	Q8N0U8	176 aa		11.92	□□□□□ -0.5
NELFCD-204	ENST00000474543	CNEP1R1	Q8N9A8	125 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms