RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 ENY2Q9NPA8 101 aa11.13□□□□□ -0.63
LDLRAP1-204ENST00000474283 NUP50Q9UKX7 468 aa11.13□□□□□ -0.63
LDLRAP1-204ENST00000474283 MINOS1-NBL1R4GNA1 71 aa11.13□□□□□ -0.63
LDLRAP1-204ENST00000474283 RAMP3O60896 148 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 PITX3O75364 302 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 TSPAN9O75954 239 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 DFFBO76075 338 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 IGKV1-5P01602 117 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 CXCL2P19875 107 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 TNFRSF9Q07011 255 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 VMA21Q3ZAQ7 101 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 TEX261Q6UWH6 196 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 ODF3L1Q8IXM7 274 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 OR5AN1Q8NGI8 311 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 OR52E5Q8NH55 327 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 TBX15Q96SF7 602 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 GPHA2Q96T91 129 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 TSNAXQ99598 290 aaKnown RBP11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 ZNF251Q9BRH9 671 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 HIPK2Q9H2X6 1198 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 OR5AC2Q9NZP5 309 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 HSPB7Q9UBY9 170 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 RCL1Q9Y2P8 373 aaKnown RBP11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 TBL2Q9Y4P3 447 aaKnown RBP11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 U3KQ87 197 aa11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 SETD2Q9BYW2 2564 aaPredicted RBP11.12□□□□□ -0.63
LDLRAP1-204ENST00000474283 A0A1W2PPE3 182 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 A0A1W2PRD5 423 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 A0A1W2PRF3 423 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 A0A1W2PRM7 423 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 BUB1B-PAK6H3BSN5 160 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 LY6G6DO95868 133 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 IFNA17P01571 189 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 ARG1P05089 322 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 FOSL1P15407 271 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 HOXB4P17483 251 aaPredicted RBP11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 SPCS3P61009 180 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 ZNF429Q86V71 674 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 PNKDQ8N490 385 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 SMIM8Q96KF7 97 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 HARBI1Q96MB7 349 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 RNF126Q9BV68 326 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 PLSCR3Q9NRY6 295 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 DPM3Q9P2X0 92 aa11.11□□□□□ -0.63
LDLRAP1-204ENST00000474283 ZFHX3Q15911 3703 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 IGHV3OR16-10A0A075B7F0 116 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 TRAV40A0A0B4J280 105 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 RNF222A6NCQ9 220 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 CEBPZOSA8MTT3 80 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 AVPP01185 164 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 IGKV1-39P01597 117 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 IGKV1D-39P04432 117 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 CT45A6P0DMU7 189 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 CT45A5P0DMU8 189 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 CT45A7P0DMV0 189 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 UBE2KP61086 200 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 POLR2GP62487 172 aaKnown RBP eCLIP11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 TMEM177Q53S58 311 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 UTF1Q5T230 341 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 CLEC9AQ6UXN8 241 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 ZNF383Q8NA42 475 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 STOML3Q8TAV4 291 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 ST6GALNAC6Q969X2 333 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 C5orf30Q96GV9 206 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 MS4A7Q9GZW8 240 aaPredicted RBP11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 TMEM140Q9NV12 185 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 ZNF257Q9Y2Q1 563 aa11.1□□□□□ -0.63
LDLRAP1-204ENST00000474283 RNASEK-C17orf49H0YIS7 233 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 H0YJW9 148 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 CHST1O43916 411 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 ACTL6BO94805 426 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 SPDEFO95238 335 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 P0C879 139 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 HKR1P10072 659 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 AARDQ4LEZ3 155 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 CXorf66Q5JRM2 361 aaPredicted RBP11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 ZNF680Q8NEM1 530 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 OR1S2Q8NGQ3 325 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 OR5B3Q8NH48 314 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 SCARB1Q8WTV0 552 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 PINX1Q96BK5 328 aaKnown RBP11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 NABP2Q9BQ15 211 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 MRPL20Q9BYC9 149 aaKnown RBP11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 PSENENQ9NZ42 101 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 FOXA2Q9Y261 457 aaPredicted RBP11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 STRAPQ9Y3F4 350 aaKnown RBP11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 SONP18583 2426 aaKnown RBP11.09□□□□□ -0.63
LDLRAP1-204ENST00000474283 CENPVL3A0A0U1RRI6 287 aa11.08□□□□□ -0.64
LDLRAP1-204ENST00000474283 C15orf61A6NNL5 157 aa11.08□□□□□ -0.64
LDLRAP1-204ENST00000474283 H0YIZ8 118 aa11.08□□□□□ -0.64
LDLRAP1-204ENST00000474283 PROP1O75360 226 aa11.08□□□□□ -0.64
LDLRAP1-204ENST00000474283 IFNA5P01569 189 aa11.08□□□□□ -0.64
LDLRAP1-204ENST00000474283 IGHV4-38-2P0DP08 117 aa11.08□□□□□ -0.64
LDLRAP1-204ENST00000474283 BRS3P32247 399 aa11.08□□□□□ -0.64
LDLRAP1-204ENST00000474283 MAS1LP35410 378 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms