RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 TXNDC17Q9BRA2 123 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 HCAR1Q9BXC0 346 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 IFI27L2Q9H2X8 130 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 BCL2L10Q9HD36 194 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 PRSS16Q9NQE7 514 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 KLRF1Q9NZS2 232 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 B4GALT7Q9UBV7 327 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 POLR1DQ9Y2S0 133 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 POLDIP2Q9Y2S7 368 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 SOX21Q9Y651 276 aaPredicted RBP6.1□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF462Q96JM2 2506 aa6.1□□□□□ -1.43
GPNMB-209ENST00000474157 CHD3Q12873 2000 aaKnown RBP6.09□□□□□ -1.43
GPNMB-209ENST00000474157 FREM2Q5SZK8 3169 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 TRBV5-7A0A0A0MS05 114 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 MUC21A0A0G2JKD1 596 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 MUC21A0A140T8X8 626 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 KBTBD11-OT1A0A1B0GTJ5 212 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 SPAARA0A1B0GVQ0 90 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 J3KT08 172 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 CDX4O14627 284 aaPredicted RBP6.09□□□□□ -1.43
GPNMB-209ENST00000474157 PIN1P1O15428 100 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 NUPR1O60356 82 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 SLC16A7O60669 478 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 TNFRSF6BO95407 300 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 PRSS56P0CW18 603 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 IGLL1P15814 213 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 CFHR2P36980 270 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 RBMXP38159 391 aaKnown RBP6.09□□□□□ -1.43
GPNMB-209ENST00000474157 FABP6P51161 128 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 FOXE3Q13461 319 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 MUC21Q5SSG8 566 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 FAM57BQ71RH2 274 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 CLDN19Q8N6F1 224 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 TMEM99Q8N816 258 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF611Q8N823 705 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 LRTM2Q8N967 370 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 OR2M3Q8NG83 312 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 OR8B12Q8NGG6 310 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 OR2AJ1Q8NGZ0 328 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 OR1L1Q8NH94 360 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 OR5P3Q8WZ94 311 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 NAT6Q93015 286 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 C10orf35Q96D05 121 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 ZNF503Q96F45 646 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 VGLL1Q99990 258 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 MLST8Q9BVC4 326 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 CHRNA10Q9GZZ6 450 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 LIN7CQ9NUP9 197 aaKnown RBP6.09□□□□□ -1.43
GPNMB-209ENST00000474157 OR1A1Q9P1Q5 309 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 TMED7Q9Y3B3 224 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 INSL5Q9Y5Q6 135 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 COL4A3Q01955 1670 aa6.09□□□□□ -1.43
GPNMB-209ENST00000474157 DOCK6Q96HP0 2047 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 HELZP42694 1942 aaKnown RBP6.08□□□□□ -1.44
GPNMB-209ENST00000474157 NSG1A0A0A6YYJ2 146 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 F5H768 121 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 RHODO00212 210 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 ST8SIA3O43173 380 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 FAM106CPP0CH98 169 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 EGR2P11161 476 aaPredicted RBP6.08□□□□□ -1.44
GPNMB-209ENST00000474157 SLC25A6P12236 298 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 IGFBP2P18065 325 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 GPR1P46091 355 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 DLX6P56179 175 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 TMPRSS3P57727 454 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 SEC61GP60059 68 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 CCL20P78556 96 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 SERF2P84101 59 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 NFATC4Q14934 902 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 FAM106AQ4KMX7 169 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 FRG2Q64ET8 278 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 FAM166AQ6J272 317 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 SHISA6Q6ZSJ9 500 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 CLECL1Q8IZS7 167 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 FBXL14Q8N1E6 418 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 OR2L13Q8N349 312 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 OR4X2Q8NGF9 303 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 OR8B3Q8NGG8 313 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 OR10G8Q8NGN5 311 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 LSM10Q969L4 123 aaKnown RBP6.08□□□□□ -1.44
GPNMB-209ENST00000474157 ELSPBP1Q96BH3 223 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 FAM3DQ96BQ1 224 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 NEURL3Q96EH8 262 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 PELI1Q96FA3 418 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 SGK494Q96LW2 274 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 FRG2BQ96QU4 278 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 OR4C12Q96R67 309 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 OR8B2Q96RD0 313 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 SPAG8Q99932 426 aaPredicted RBP6.08□□□□□ -1.44
GPNMB-209ENST00000474157 PAAF1Q9BRP4 392 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 EBPLQ9BY08 206 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 PLA2G2FQ9BZM2 168 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 TMEM191AQ9H0A3 160 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 FNDC4Q9H6D8 234 aaPredicted RBP6.08□□□□□ -1.44
GPNMB-209ENST00000474157 PLEKHF2Q9H8W4 249 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 HES4Q9HCC6 221 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 SERTAD4Q9NUC0 356 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 RARRES3Q9UL19 164 aa6.08□□□□□ -1.44
GPNMB-209ENST00000474157 ANAPC10Q9UM13 185 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms