RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 NUPR1O60356 82 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 TNFSF10P50591 281 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 TREML4Q6UXN2 200 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 TCF23Q7RTU1 214 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 PRR7Q8TB68 274 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 TP53TG5Q9Y2B4 290 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 F6UZH7 168 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 SOX15O60248 233 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 SCGB1D1O95968 90 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 GCH1P30793 250 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 DUTP33316 252 aaKnown RBP17.5■□□□□ 0.39
COL18A1-207ENST00000473212 KIR2DL2P43627 348 aaPredicted RBP17.5■□□□□ 0.39
COL18A1-207ENST00000473212 GPR12P47775 334 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 CCL11P51671 97 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 PRAMEF5Q5TYX0 476 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 MIC13Q5XKP0 118 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 Q6ZT83 130 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 TGIF2LXQ8IUE1 241 aa17.5■□□□□ 0.39
COL18A1-207ENST00000473212 CEP250Q9BV73 2442 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 TRAV3A0A0B4J244 114 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 SPINT2O43291 252 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 FOXL1Q12952 345 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 MSMPQ1L6U9 139 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 TMEM249Q2WGJ8 235 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 MGST2Q99735 147 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 HEYLQ9NQ87 328 aaPredicted RBP17.49■□□□□ 0.39
COL18A1-207ENST00000473212 FKBP11Q9NYL4 201 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 ELOVL5Q9NYP7 299 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 CACNA1GO43497 2377 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 IGHV3OR15-7A0A075B7D8 119 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 MDFIC2A0A1B0GVS7 189 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 C15orf65H3BRN8 121 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 EREGO14944 169 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 PDLIM3Q53GG5 364 aaPredicted RBP17.49■□□□□ 0.39
COL18A1-207ENST00000473212 RPL39P5Q59GN2 51 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 TEX38Q6PEX7 206 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 OR4A16Q8NH70 328 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 MS4A5Q9H3V2 200 aa17.49■□□□□ 0.39
COL18A1-207ENST00000473212 SCO2A0A1W2PP80 73 aa17.48■□□□□ 0.39
COL18A1-207ENST00000473212 IGKV3-15P01624 115 aa17.48■□□□□ 0.39
COL18A1-207ENST00000473212 OPRK1P41145 380 aa17.48■□□□□ 0.39
COL18A1-207ENST00000473212 INO80CQ6PI98 192 aaPredicted RBP17.48■□□□□ 0.39
COL18A1-207ENST00000473212 LRRC29Q8WV35 223 aa17.48■□□□□ 0.39
COL18A1-207ENST00000473212 LEAP2Q969E1 77 aa17.48■□□□□ 0.39
COL18A1-207ENST00000473212 IMMP2LQ96T52 175 aa17.48■□□□□ 0.39
COL18A1-207ENST00000473212 ZNF891A8MT65 544 aaPredicted RBP17.48■□□□□ 0.39
COL18A1-207ENST00000473212 C1orf229Q6ZS94 237 aaPredicted RBP17.48■□□□□ 0.39
COL18A1-207ENST00000473212 LRP11Q86VZ4 500 aa17.48■□□□□ 0.39
COL18A1-207ENST00000473212 SPCS3P61009 180 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 SMIM21Q3B7S5 101 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 ABHD12Q8N2K0 398 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 TMEM178AQ8NBL3 297 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 FDCSPQ8NFU4 85 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 TTC28Q96AY4 2481 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 PLCE1Q9P212 2302 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 AQP7O14520 342 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 HPRT1P00492 218 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 STAG3L2P0CL84 134 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 STAG3L3P0CL85 134 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 ADMP35318 185 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 ZNF134P52741 427 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 GGTLC1Q9BX51 225 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 GNG12Q9UBI6 72 aa17.47■□□□□ 0.39
COL18A1-207ENST00000473212 TNCP24821 2201 aa17.46■□□□□ 0.39
COL18A1-207ENST00000473212 MPDU1O75352 247 aa17.46■□□□□ 0.39
COL18A1-207ENST00000473212 ADH4P08319 380 aa17.46■□□□□ 0.39
COL18A1-207ENST00000473212 KITLGP21583 273 aa17.46■□□□□ 0.39
COL18A1-207ENST00000473212 THBS3P49746 956 aa17.46■□□□□ 0.39
COL18A1-207ENST00000473212 RPP30P78346 268 aaKnown RBP17.46■□□□□ 0.39
COL18A1-207ENST00000473212 HTD2P86397 168 aa17.46■□□□□ 0.39
COL18A1-207ENST00000473212 TRIP6Q15654 476 aaKnown RBP17.46■□□□□ 0.39
COL18A1-207ENST00000473212 SSMEM1Q8WWF3 244 aa17.46■□□□□ 0.39
COL18A1-207ENST00000473212 BTF3L4Q96K17 158 aa17.46■□□□□ 0.39
COL18A1-207ENST00000473212 M0R1X1 148 aa17.46■□□□□ 0.38
COL18A1-207ENST00000473212 VDAC2P45880 294 aaPredicted RBP17.46■□□□□ 0.38
COL18A1-207ENST00000473212 PLA2G2CQ5R387 149 aa17.46■□□□□ 0.38
COL18A1-207ENST00000473212 OCC1Q8TAD7 63 aa17.46■□□□□ 0.38
COL18A1-207ENST00000473212 DMXL2Q8TDJ6 3036 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 GRIFINA4D1Z8 144 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 CXorf1O96002 111 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 WT1P19544 449 aaPredicted RBP17.45■□□□□ 0.38
COL18A1-207ENST00000473212 AARDQ4LEZ3 155 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 FAM201AQ5SY85 155 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 ZNRF1Q8ND25 227 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 OR2Z1Q8NG97 314 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 OPN3Q9H1Y3 402 aaPredicted RBP17.45■□□□□ 0.38
COL18A1-207ENST00000473212 POLR3KQ9Y2Y1 108 aaPredicted RBP17.45■□□□□ 0.38
COL18A1-207ENST00000473212 YTHDF2Q9Y5A9 579 aaKnown RBP17.45■□□□□ 0.38
COL18A1-207ENST00000473212 ROS1P08922 2347 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 PRSS46E5RG02 174 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 GFRA3O60609 400 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 RAB4BP61018 213 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 GUSBP1Q15486 140 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 MS4A10Q96PG2 267 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 CBLN4Q9NTU7 201 aa17.45■□□□□ 0.38
COL18A1-207ENST00000473212 DSCAMO60469 2012 aa17.44■□□□□ 0.38
COL18A1-207ENST00000473212 IGKV1D-17A0A075B6S4 117 aa17.44■□□□□ 0.38
COL18A1-207ENST00000473212 HOXC12P31275 282 aa17.44■□□□□ 0.38
COL18A1-207ENST00000473212 PRDX2P32119 198 aa17.44■□□□□ 0.38
COL18A1-207ENST00000473212 TIMP3P35625 211 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms