RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 COQ4Q9Y3A0 265 aa0.46□□□□□ -2.34
COMMD3-211ENST00000472673 DICER1Q9UPY3 1922 aaKnown RBP0.46□□□□□ -2.34
COMMD3-211ENST00000472673 NSA2O95478 260 aaKnown RBP0.45□□□□□ -2.34
COMMD3-211ENST00000472673 REG1AP05451 166 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 UBBP0CG47 229 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 CCL5P13501 91 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 UGT2B7P16662 529 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 MSNP26038 577 aaKnown RBP0.45□□□□□ -2.34
COMMD3-211ENST00000472673 EMP1P54849 157 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 AP1S1P61966 158 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 FKBP1AP62942 108 aaKnown RBP0.45□□□□□ -2.34
COMMD3-211ENST00000472673 ELOBQ15370 118 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 DEFB115Q30KQ5 88 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 ACSM3Q53FZ2 586 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 FAM27BQ5VT28 67 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 DNM1P34Q6PK57 102 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 FUNDC1Q8IVP5 155 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 UMODL1-AS1Q8N2C9 162 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 SGMS2Q8NHU3 365 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 DNAJB3Q8WWF6 145 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 ASB13Q8WXK3 278 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 ACOT12Q8WYK0 555 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 TESCQ96BS2 214 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 GNPNAT1Q96EK6 184 aaPredicted RBP0.45□□□□□ -2.34
COMMD3-211ENST00000472673 SLC22A4Q9H015 551 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 MED9Q9NWA0 146 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 CD300AQ9UGN4 299 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 C22orf24Q9Y442 160 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 TIMM22Q9Y584 194 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 KIF24Q5T7B8 1368 aa0.45□□□□□ -2.34
COMMD3-211ENST00000472673 SCAF11Q99590 1463 aaKnown RBP0.44□□□□□ -2.34
COMMD3-211ENST00000472673 TEX50A0A1B0GTY4 177 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 ERICH2A1L162 156 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 TRAPPC13A5PLN9 417 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 MEIS3P1A6NDR6 274 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 GOLGA6L10A6NI86 522 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 IBA57-AS1B1ANH7 110 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 HIST1H1CP16403 213 aaKnown RBP0.44□□□□□ -2.34
COMMD3-211ENST00000472673 ALDH3A1P30838 453 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 CXCR4P61073 352 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 PLPPR5Q32ZL2 321 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 RPS19BP1Q86WX3 136 aaKnown RBP0.44□□□□□ -2.34
COMMD3-211ENST00000472673 CD302Q8IX05 232 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 TMEM86AQ8N2M4 240 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 RPP25LQ8N5L8 163 aaKnown RBP0.44□□□□□ -2.34
COMMD3-211ENST00000472673 UBL4BQ8N7F7 174 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 ZNF676Q8N7Q3 588 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 ERMAPQ96PL5 475 aaPredicted RBP0.44□□□□□ -2.34
COMMD3-211ENST00000472673 REG4Q9BYZ8 158 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 UPF3BQ9BZI7 483 aaKnown RBP0.44□□□□□ -2.34
COMMD3-211ENST00000472673 CHST6Q9GZX3 395 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 HES4Q9HCC6 221 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 EURLQ9NYK6 297 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 ANAPC10Q9UM13 185 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 PRELID1Q9Y255 219 aa0.44□□□□□ -2.34
COMMD3-211ENST00000472673 ALPK2Q86TB3 2170 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 APCP25054 2843 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 TMEM213A2RRL7 107 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 FABP12A6NFH5 140 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 OR51F1A6NGY5 319 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 TMEM212A6NML5 194 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 HSBP1L1C9JCN9 74 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 I3L521 148 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 LEPROTO15243 131 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 BIRC5O15392 142 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 NEMFO60524 1076 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 APOMO95445 188 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 NPPAP01160 153 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 HLA-DMBP28068 263 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 CD40LGP29965 261 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 EVX1P49640 407 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 RAB13P51153 203 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 AKR1C1Q04828 323 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 PPP1R1AQ13522 171 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 EBPQ15125 230 aaKnown RBP0.43□□□□□ -2.34
COMMD3-211ENST00000472673 C9orf64Q5T6V5 341 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 SDHAF4Q5VUM1 108 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 SBSNQ6UWP8 590 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 SSX8Q7RTT4 187 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 FAM19A5Q7Z5A7 132 aaPredicted RBP0.43□□□□□ -2.34
COMMD3-211ENST00000472673 TBC1D19Q8N5T2 526 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 HAVCR2Q8TDQ0 301 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 PACRGQ96M98 296 aaPredicted RBP0.43□□□□□ -2.34
COMMD3-211ENST00000472673 C7orf50Q9BRJ6 194 aaKnown RBP0.43□□□□□ -2.34
COMMD3-211ENST00000472673 DCUN1D5Q9BTE7 237 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 OR8D2Q9GZM6 311 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 WDR54Q9H977 334 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 NUP160Q12769 1436 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 SETD5Q9C0A6 1442 aa0.43□□□□□ -2.34
COMMD3-211ENST00000472673 GLI3P10071 1580 aa0.42□□□□□ -2.34
COMMD3-211ENST00000472673 F5H768 121 aa0.42□□□□□ -2.34
COMMD3-211ENST00000472673 HPGDSO60760 199 aa0.42□□□□□ -2.34
COMMD3-211ENST00000472673 CSN1S1P47710 185 aa0.42□□□□□ -2.34
COMMD3-211ENST00000472673 REG1BP48304 166 aa0.42□□□□□ -2.34
COMMD3-211ENST00000472673 UBE2G2P60604 165 aa0.42□□□□□ -2.34
COMMD3-211ENST00000472673 HIST1H4AP62805 103 aaKnown RBP0.42□□□□□ -2.34
COMMD3-211ENST00000472673 C1orf194Q5T5A4 169 aa0.42□□□□□ -2.34
COMMD3-211ENST00000472673 HIST2H3AQ71DI3 136 aa0.42□□□□□ -2.34
COMMD3-211ENST00000472673 C10orf67Q8IYJ2 551 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms