RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ZNF320A2RRD8 509 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 MFSD2BA6NFX1 497 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 PRSS29PA6NIE9 313 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 A8MWP6 167 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 J3QRK9 145 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 SLC17A2O00624 439 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 UBE2CO00762 179 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 FCGR3AP08637 254 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 ARL3P36405 182 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 CDK10Q15131 360 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 RBMS2Q15434 407 aaKnown RBP6.87□□□□□ -1.31
VCL-204ENST00000472585 RTL8BQ17RB0 113 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 VMA21Q3ZAQ7 101 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 HSD17B12Q53GQ0 312 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 XP32Q5T750 250 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 H1FOOQ8IZA3 346 aaPredicted RBP6.87□□□□□ -1.31
VCL-204ENST00000472585 C2CD4CQ8TF44 421 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 TMEM203Q969S6 136 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 ZNF414Q96IQ9 312 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 SPIN2AQ99865 258 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 SPIN2BQ9BPZ2 258 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 URM1Q9BTM9 101 aaKnown RBP6.87□□□□□ -1.31
VCL-204ENST00000472585 MFFQ9GZY8 342 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 FBXL17Q9UF56 701 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 DYNC1H1Q14204 4646 aaKnown RBP6.87□□□□□ -1.31
VCL-204ENST00000472585 DNAH17Q9UFH2 4485 aa6.87□□□□□ -1.31
VCL-204ENST00000472585 IGHV3-35A0A0C4DH35 117 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 TMEM272A0A1B0GTI8 110 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 NPIPB5A8MRT5 1133 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 FCGR3BO75015 233 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 CLEC3BP05452 202 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 CRYGCP07315 174 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 ZNF735P0CB33 412 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 RRASP10301 218 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 FCGR2BP31994 310 aaPredicted RBP6.86□□□□□ -1.31
VCL-204ENST00000472585 SERPINB10P48595 397 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 EIF4EBP1Q13541 118 aaPredicted RBP6.86□□□□□ -1.31
VCL-204ENST00000472585 ZNF124Q15973 351 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 ODF3L2Q3SX64 289 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 ZNF585BQ52M93 769 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 PUSL1Q8N0Z8 303 aaKnown RBP6.86□□□□□ -1.31
VCL-204ENST00000472585 MS4A15Q8N5U1 240 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 STPG3Q8N7X2 389 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 BPIFB6Q8NFQ5 453 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 OR10J5Q8NHC4 309 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 OSR1Q8TAX0 266 aaPredicted RBP6.86□□□□□ -1.31
VCL-204ENST00000472585 FAM3DQ96BQ1 224 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 SLC2A9Q9NRM0 540 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 ZNF257Q9Y2Q1 563 aa6.86□□□□□ -1.31
VCL-204ENST00000472585 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 IGKV1D-13A0A0B4J2D9 117 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 RAB27BO00194 218 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 MYL12BO14950 172 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 REG1AP05451 166 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 CDK1P06493 297 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 IGKV1-13P0DP09 117 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 GNB3P16520 340 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 CTRB1P17538 263 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 RPL35AP18077 110 aaKnown RBP6.85□□□□□ -1.31
VCL-204ENST00000472585 MAP2K4P45985 399 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 NANOS2P60321 138 aaKnown RBP6.85□□□□□ -1.31
VCL-204ENST00000472585 MED21Q13503 144 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 OR2B11Q5JQS5 317 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 FAM209BQ5JX69 171 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 TTC23Q5W5X9 447 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 CTRB2Q6GPI1 263 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 MMD2Q8IY49 270 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 OR1L6Q8NGR2 347 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 C11orf45Q8TAV5 145 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 FYTTD1Q96QD9 318 aaKnown RBP6.85□□□□□ -1.31
VCL-204ENST00000472585 GPHA2Q96T91 129 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 OR51E2Q9H255 320 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 DNAH11Q96DT5 4516 aa6.85□□□□□ -1.31
VCL-204ENST00000472585 TRAV25A0A0B4J276 109 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 IGLL5B9A064 214 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 MFNGO00587 321 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 DENRO43583 198 aaKnown RBP6.84□□□□□ -1.31
VCL-204ENST00000472585 PSMB6P28072 239 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 RPS25P62851 125 aaKnown RBP6.84□□□□□ -1.31
VCL-204ENST00000472585 ID3Q02535 119 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 IRF3Q14653 427 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 SPHARQ15513 63 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 RAB11BQ15907 218 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 FAM106AQ4KMX7 169 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 LIPKQ5VXJ0 399 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 SLC38A6Q8IZM9 456 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 DHRSXQ8N5I4 330 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 OR2C3Q8N628 320 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 GVQW1Q8N7I0 195 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 OR56B1Q8NGI3 324 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 ZNF502Q8TBZ5 544 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 ADTRPQ96IZ2 230 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 MAP6D1Q9H9H5 199 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 PLGRKTQ9HBL7 147 aa6.84□□□□□ -1.31
VCL-204ENST00000472585 A0A075B6Q4 140 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 TRAV3A0A0B4J244 114 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 ACTL6BO94805 426 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 KBTBD11O94819 623 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 DIRAS3O95661 229 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 HLA-DQB1P01920 261 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms