RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 ZNF251Q9BRH9 671 aa1.92□□□□□ -2.1
SGCE-210ENST00000472326 CXCL16Q9H2A7 254 aa1.92□□□□□ -2.1
SGCE-210ENST00000472326 CD300AQ9UGN4 299 aa1.92□□□□□ -2.1
SGCE-210ENST00000472326 SVEP1Q4LDE5 3571 aa1.92□□□□□ -2.1
SGCE-210ENST00000472326 DOCK10Q96BY6 2186 aa1.92□□□□□ -2.1
SGCE-210ENST00000472326 ABCA4P78363 2273 aa1.92□□□□□ -2.1
SGCE-210ENST00000472326 RYR1P21817 5038 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 PLIN4Q96Q06 1357 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 IGHV2-26A0A0B4J1V2 119 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 TMEM213A2RRL7 107 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 ARGFXA6NJG6 315 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 H3BRN7 92 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 CETN3O15182 167 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 LCN1P31025 176 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 GABRA4P48169 554 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 STX3Q13277 289 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 C6orf183Q5T699 404 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 MRPL52Q86TS9 123 aaKnown RBP1.91□□□□□ -2.1
SGCE-210ENST00000472326 NELFBQ8WX92 580 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 BIRC8Q96P09 236 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 TRNT1Q96Q11 434 aaKnown RBP1.91□□□□□ -2.1
SGCE-210ENST00000472326 APOL4Q9BPW4 351 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 HINT2Q9BX68 163 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 TREM1Q9NP99 234 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 MAT2BQ9NZL9 334 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 POMPQ9Y244 141 aa1.91□□□□□ -2.1
SGCE-210ENST00000472326 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.91□□□□□ -2.1
SGCE-210ENST00000472326 MYO18AQ92614 2054 aaKnown RBP1.9□□□□□ -2.1
SGCE-210ENST00000472326 PRKDCP78527 4128 aaKnown RBP1.9□□□□□ -2.1
SGCE-210ENST00000472326 GOLGA8QA0A0J9YX86 632 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 A0A1W2PQL4 384 aaPredicted RBP1.9□□□□□ -2.11
SGCE-210ENST00000472326 A0A1W2PRG6 482 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 FNDC10F2Z333 226 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 I3L4J1 428 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 TRAPPC3O43617 180 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 GP1BAP07359 652 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 CPMP14384 443 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 EIF3IQ13347 325 aaKnown RBP1.9□□□□□ -2.11
SGCE-210ENST00000472326 XRCC4Q13426 336 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 OR4D1Q15615 310 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 ACTL10Q5JWF8 245 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 CASTOR1Q8WTX7 329 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 SPACA1Q9HBV2 294 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 CLEC2DQ9UHP7 191 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 NOSIPQ9Y314 301 aaKnown RBP1.9□□□□□ -2.11
SGCE-210ENST00000472326 PCLOQ9Y6V0 5065 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 ZGRF1Q86YA3 2104 aa1.9□□□□□ -2.11
SGCE-210ENST00000472326 TRRAPQ9Y4A5 3859 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 TNRC6AQ8NDV7 1962 aaKnown RBP1.89□□□□□ -2.11
SGCE-210ENST00000472326 SCN8AQ9UQD0 1980 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 IGSF23A1L1A6 192 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 SHOX2O60902 331 aaPredicted RBP1.89□□□□□ -2.11
SGCE-210ENST00000472326 SC5DO75845 299 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 CA2P00918 260 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 SLC2A1P11166 492 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 ZNF3P17036 446 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 GTF2H1P32780 548 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 RAB38P57729 211 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 SLAMF1Q13291 335 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 SYCP1Q15431 976 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 ZBTB6Q15916 424 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 PDPK2PQ6A1A2 396 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 SSX7Q7RTT5 188 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 MUC15Q8N387 334 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 SPICQ8N5J4 248 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 CDRT4Q8N9R6 151 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 OR4C6Q8NH72 309 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 LRRC45Q96CN5 670 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 COPS4Q9BT78 406 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 ALX4Q9H161 411 aaPredicted RBP1.89□□□□□ -2.11
SGCE-210ENST00000472326 AMMECR1Q9Y4X0 333 aaPredicted RBP1.89□□□□□ -2.11
SGCE-210ENST00000472326 USH1CQ9Y6N9 552 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 WNK1Q9H4A3 2382 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 CHD3Q12873 2000 aaKnown RBP1.89□□□□□ -2.11
SGCE-210ENST00000472326 ANK3Q12955 4377 aaKnown RBP1.89□□□□□ -2.11
SGCE-210ENST00000472326 HYDINQ4G0P3 5121 aa1.89□□□□□ -2.11
SGCE-210ENST00000472326 A0A0J9YX75 114 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 MGAT4DA6NG13 374 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 hCG_2039718K7EN88 272 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 ZNF7P17097 686 aaPredicted RBP1.88□□□□□ -2.11
SGCE-210ENST00000472326 RPA3P35244 121 aaPredicted RBP1.88□□□□□ -2.11
SGCE-210ENST00000472326 TTPAP49638 278 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 TSPAN31Q12999 210 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 CLEC20AQ6ZU45 233 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 C2orf73Q8N5S3 287 aaPredicted RBP1.88□□□□□ -2.11
SGCE-210ENST00000472326 WFDC11Q8NEX6 87 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 SERPINB11Q96P15 392 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 PRRG3Q9BZD7 231 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 ZNHIT6Q9NWK9 470 aaKnown RBP1.88□□□□□ -2.11
SGCE-210ENST00000472326 FAM206AQ9NX38 181 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 MRM2Q9UI43 246 aaKnown RBP1.88□□□□□ -2.11
SGCE-210ENST00000472326 NXT1Q9UKK6 140 aaKnown RBP1.88□□□□□ -2.11
SGCE-210ENST00000472326 POFUT2Q9Y2G5 429 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 MYH9P35579 1960 aaKnown RBP1.88□□□□□ -2.11
SGCE-210ENST00000472326 MGAM2Q2M2H8 2515 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 PLXNA2O75051 1894 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 OBSL1O75147 1896 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 RP1P56715 2156 aa1.88□□□□□ -2.11
SGCE-210ENST00000472326 NUMA1Q14980 2115 aa1.87□□□□□ -2.11
SGCE-210ENST00000472326 A0A1B0GW15 77 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms