RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ZNF93P35789 620 aaPredicted RBP-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 SMAGPQ0VAQ4 97 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 STX3Q13277 289 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 OR5B17Q8NGF7 314 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 LRRC20Q8TCA0 184 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 SMIM12Q96EX1 92 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 TMEM109Q9BVC6 243 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 YIPF3Q9GZM5 350 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 PARVAQ9NVD7 372 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 TMEM94Q12767 1356 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 E9PCH4 1651 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 PEAK1Q9H792 1746 aa-0.25□□□□□ -2.45
PRPF40A-207ENST00000471701 TRBV10-2A0A0K0K1G8 114 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 METTL15A6NJ78 407 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 OR2T1O43869 369 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 HMMRO75330 724 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 NSA2O95478 260 aaKnown RBP-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 PMP2P02689 132 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 CCL2P13500 99 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 CXCL3P19876 107 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 GRPRP30550 384 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 SLCO1A2P46721 670 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 UBE2IP63279 158 aaKnown RBP-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 AKR1C1Q04828 323 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 CIRBPQ14011 172 aaKnown RBP-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 C10orf67Q8IYJ2 551 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 ST13P4Q8IZP2 240 aaPredicted RBP-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 ZNF676Q8N7Q3 588 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 AMELYQ99218 206 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 MED10Q9BTT4 135 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 MROQ9BYG7 248 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 CD300AQ9UGN4 299 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 BAIAP2Q9UQB8 552 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 ANAPC1Q9H1A4 1944 aa-0.26□□□□□ -2.45
PRPF40A-207ENST00000471701 GOLGA6L10A6NI86 522 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 H0YC42 278 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 BRI3O95415 125 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 MSMBP08118 114 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 FABP5Q01469 135 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 OR4D1Q15615 310 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 BLIDQ8IZY5 108 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 PPCDCQ96CD2 204 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 OR8D2Q9GZM6 311 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 HEATR5AQ86XA9 2040 aa-0.27□□□□□ -2.45
PRPF40A-207ENST00000471701 COX7A2LO14548 114 aa-0.28□□□□□ -2.45
PRPF40A-207ENST00000471701 SHBGP04278 402 aa-0.28□□□□□ -2.45
PRPF40A-207ENST00000471701 PVALBP20472 110 aaPredicted RBP-0.28□□□□□ -2.45
PRPF40A-207ENST00000471701 RPL30P62888 115 aaKnown RBP-0.28□□□□□ -2.45
PRPF40A-207ENST00000471701 NDUFA5Q16718 116 aa-0.28□□□□□ -2.45
PRPF40A-207ENST00000471701 LCA10Q71F78 164 aa-0.28□□□□□ -2.45
PRPF40A-207ENST00000471701 OR10D3Q8NH80 312 aa-0.28□□□□□ -2.45
PRPF40A-207ENST00000471701 ASCL3Q9NQ33 180 aa-0.28□□□□□ -2.45
PRPF40A-207ENST00000471701 RP1P56715 2156 aa-0.28□□□□□ -2.45
PRPF40A-207ENST00000471701 GOLGA8QA0A0J9YX86 632 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 AZIN1O14977 448 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 LEPROTO15243 131 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 LINC00614P0C842 121 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 HLA-DMBP28068 263 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 MIPP30301 263 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 CARD18P57730 90 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 C4orf26Q17RF5 130 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 Q8N814 137 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 CCL13Q99616 98 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 NSRP1Q9H0G5 558 aaKnown RBP-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 METTL9Q9H1A3 318 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 CISHQ9NSE2 258 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 CCDC88AQ3V6T2 1871 aa-0.29□□□□□ -2.46
PRPF40A-207ENST00000471701 TTC21AQ8NDW8 1320 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 DAPL1A0PJW8 107 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 CLPSP04118 112 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 HLA-DRB3P79483 266 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 RBM48Q5RL73 367 aaKnown RBP-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 SSX8Q7RTT4 187 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 RIBC1Q8N443 379 aaPredicted RBP-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 OR52E4Q8NGH9 312 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 STOML3Q8TAV4 291 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 GNPNAT1Q96EK6 184 aaPredicted RBP-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 KLK9Q9UKQ9 250 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 PRELID1Q9Y255 219 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 COL1A1P02452 1464 aaPredicted RBP-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 MCM3APO60318 1980 aa-0.3□□□□□ -2.46
PRPF40A-207ENST00000471701 A0A1W2PPM0 123 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 C21orf140B9A014 251 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 K7ERQ8 282 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 FADS2O95864 444 aaKnown RBP-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 SULT1A3P0DMM9 295 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 SULT1A4P0DMN0 295 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 BRS3P32247 399 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 HAAOP46952 286 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 SUPT4H1P63272 117 aaKnown RBP-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 JOSD1Q15040 202 aaPredicted RBP-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 GDF5OSQ5U4N7 250 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 ZNF418Q8TF45 676 aaPredicted RBP-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 CCDC124Q96CT7 223 aaKnown RBP-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 TMEM70Q9BUB7 260 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 HRASLSQ9HDD0 168 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 PLAC8Q9NZF1 115 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 COQ4Q9Y3A0 265 aa-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 COL7A1Q02388 2944 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms