RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TRDCB7Z8K6 153 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 TEX22C9J3V5 150 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 MRPS14O60783 128 aaKnown RBP5.01□□□□□ -1.61
HDAC1-204ENST00000471488 YIF1AO95070 293 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 LALBAP00709 142 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 HTN3P15516 51 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 PSMB6P28072 239 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 RPL11P62913 178 aaKnown RBP5.01□□□□□ -1.61
HDAC1-204ENST00000471488 P2RY14Q15391 338 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 SMN1Q16637 294 aaKnown RBP5.01□□□□□ -1.61
HDAC1-204ENST00000471488 RBM48Q5RL73 367 aaKnown RBP5.01□□□□□ -1.61
HDAC1-204ENST00000471488 C1orf134Q5TEV5 83 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 C1orf146Q5VVC0 180 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 ZNF880Q6PDB4 577 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 NKAIN3Q8N8D7 197 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 OSR1Q8TAX0 266 aaPredicted RBP5.01□□□□□ -1.61
HDAC1-204ENST00000471488 PTX4Q96A99 478 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 C5orf30Q96GV9 206 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 CENPNQ96H22 339 aaPredicted RBP5.01□□□□□ -1.61
HDAC1-204ENST00000471488 CMTM3Q96MX0 182 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 FANCD2OSQ96PS1 177 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 SLC29A1Q99808 456 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 UQCC2Q9BRT2 126 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 SCRT1Q9BWW7 348 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 Q9N2K0 584 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 DAZ1Q9NQZ3 744 aaKnown RBP5.01□□□□□ -1.61
HDAC1-204ENST00000471488 GHRLQ9UBU3 117 aa5.01□□□□□ -1.61
HDAC1-204ENST00000471488 DYNC1H1Q14204 4646 aaKnown RBP5□□□□□ -1.61
HDAC1-204ENST00000471488 TRBV5-7A0A0A0MS05 114 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 A0A0A6YYD4 124 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 LINC00473A8K010 186 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 NPIPB5A8MRT5 1133 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 E7EUB6 86 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 DNASE2O00115 360 aaPredicted RBP5□□□□□ -1.61
HDAC1-204ENST00000471488 OGG1O15527 345 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 FABP7O15540 132 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 IL6RP08887 468 aaPredicted RBP5□□□□□ -1.61
HDAC1-204ENST00000471488 UBBP0CG47 229 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 RBMY1A1P0DJD3 496 aaKnown RBP5□□□□□ -1.61
HDAC1-204ENST00000471488 RBMY1CP0DJD4 496 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 C8orf88P0DMB2 117 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 HIST1H1BP16401 226 aaKnown RBP5□□□□□ -1.61
HDAC1-204ENST00000471488 SRMP19623 302 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 GALP22466 123 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 ADMP35318 185 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 UNC119Q13432 240 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 LGALS9BQ3B8N2 356 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 Q56UQ5 140 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 KCTD9Q7L273 389 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 STHQ8IWL8 128 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 Q8N1X5 172 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 TCTEX1D2Q8WW35 142 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 ARHGAP5-AS1Q96IT6 56 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 ADTRPQ96IZ2 230 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 DERL3Q96Q80 235 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 RNF2Q99496 336 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 URM1Q9BTM9 101 aaKnown RBP5□□□□□ -1.61
HDAC1-204ENST00000471488 RNF126Q9BV68 326 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 OR51E2Q9H255 320 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 PLGRKTQ9HBL7 147 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 HRASLSQ9HDD0 168 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 SLC2A9Q9NRM0 540 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 CLEC5AQ9NY25 188 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 CLEC2DQ9UHP7 191 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 SPATA2Q9UM82 520 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 MRPS7Q9Y2R9 242 aaKnown RBP5□□□□□ -1.61
HDAC1-204ENST00000471488 PRELID3BQ9Y3B1 194 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 PKD1P98161 4303 aa5□□□□□ -1.61
HDAC1-204ENST00000471488 TGOLN2O43493 480 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 CDK2AP2O75956 126 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 KBTBD11O94819 623 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 ALPLP05186 524 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 EIF4EP06730 217 aaKnown RBP4.99□□□□□ -1.61
HDAC1-204ENST00000471488 CELP19835 753 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 MAPK3P27361 379 aaPredicted RBP4.99□□□□□ -1.61
HDAC1-204ENST00000471488 DUTP33316 252 aaKnown RBP4.99□□□□□ -1.61
HDAC1-204ENST00000471488 SERPINB10P48595 397 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 EMP1P54849 157 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 ELLP55199 621 aaPredicted RBP4.99□□□□□ -1.61
HDAC1-204ENST00000471488 CMC4P56277 68 aaPredicted RBP4.99□□□□□ -1.61
HDAC1-204ENST00000471488 DEFB131AP59861 70 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 RPS11P62280 158 aaKnown RBP eCLIP4.99□□□□□ -1.61
HDAC1-204ENST00000471488 PAFAH1B2P68402 229 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 TNP2Q05952 138 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 INSL4Q14641 139 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 SLC25A24Q6NUK1 477 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 CDH26Q8IXH8 852 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 Q8NAQ8 132 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 OR4A4PQ8NGN8 299 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 PYDC1Q8WXC3 89 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 TMEM190Q8WZ59 177 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 OR2A7Q96R45 310 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 ARPC5LQ9BPX5 153 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 HINT2Q9BX68 163 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 PECRQ9BY49 303 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 THYN1Q9P016 225 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 RABAC1Q9UI14 185 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 CELA1Q9UNI1 258 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 DNAH17Q9UFH2 4485 aa4.99□□□□□ -1.61
HDAC1-204ENST00000471488 HERC1Q15751 4861 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms