RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PET100P0DJ07 73 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 MYCNOSP40205 109 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 THBS3P49746 956 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 TAGLNQ01995 201 aaKnown RBP10.63□□□□□ -0.71
HMGN1-211ENST00000471260 HMGN3Q15651 99 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 NKAPLQ5M9Q1 402 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 FAM89BQ8N5H3 189 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 FAM71E2Q8N5Q1 922 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 LINC00482Q8N8I6 264 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 STOML3Q8TAV4 291 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 RAB3CQ96E17 227 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 SULT4A1Q9BR01 284 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 PDCD10Q9BUL8 212 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 MCRIP2Q9BUT9 160 aaKnown RBP10.63□□□□□ -0.71
HMGN1-211ENST00000471260 PLEKHJ1Q9NW61 149 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 AURKAIP1Q9NWT8 199 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-211ENST00000471260 TRBV6-7A0A0A0MS04 114 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 TRBV6-6A0A0A6YYG2 114 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 RNF222A6NCQ9 220 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 ELANEP08246 267 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 OR5H8P0DN80 308 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 BLVRBP30043 206 aaPredicted RBP10.62□□□□□ -0.71
HMGN1-211ENST00000471260 HRH1P35367 487 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 PPP1R1AQ13522 171 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 TMEM128Q5BJH2 165 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 OR10K2Q6IF99 312 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 FAM71F2Q6NXP2 309 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 ZNF880Q6PDB4 577 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 UQCC3Q6UW78 93 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 MOB1BQ7L9L4 216 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 C6orf201Q7Z4U5 140 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 MRPL41Q8IXM3 137 aaKnown RBP10.62□□□□□ -0.71
HMGN1-211ENST00000471260 RNF152Q8N8N0 203 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 BVESQ8NE79 360 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 OR52L2PQ8NGH6 319 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 OR1S1Q8NH92 325 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 THAP6Q8TBB0 222 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 WDR89Q96FK6 387 aaPredicted RBP10.62□□□□□ -0.71
HMGN1-211ENST00000471260 FAAP24Q9BTP7 215 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 LINC00527Q9UJ94 153 aa10.62□□□□□ -0.71
HMGN1-211ENST00000471260 DNAH3Q8TD57 4116 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 LINC01548A6NM66 108 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 ITGB1BP1O14713 200 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 SSX5O60225 188 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 NAPSAO96009 420 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 IGF1P05019 195 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 PPP1CCP36873 323 aaKnown RBP10.61□□□□□ -0.71
HMGN1-211ENST00000471260 F2RL1P55085 397 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 FOXE3Q13461 319 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 CXorf66Q5JRM2 361 aaPredicted RBP10.61□□□□□ -0.71
HMGN1-211ENST00000471260 ALKAL2Q6UX46 152 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 ETV3LQ6ZN32 361 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 ZNF833PQ6ZTB9 187 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 LHFPL1Q86WI0 220 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 ZNF695Q8IW36 515 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 ODF3L1Q8IXM7 274 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 INO80EQ8NBZ0 244 aaPredicted RBP10.61□□□□□ -0.71
HMGN1-211ENST00000471260 OR5H2Q8NGV7 314 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 TERB2Q8NHR7 220 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 COQ8AQ8NI60 647 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 NUDCD2Q8WVJ2 157 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 ZMAT5Q9UDW3 170 aaKnown RBP10.61□□□□□ -0.71
HMGN1-211ENST00000471260 HSF4Q9ULV5 492 aa10.61□□□□□ -0.71
HMGN1-211ENST00000471260 FOXI3A8MTJ6 420 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-211ENST00000471260 RAB29O14966 203 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 IGHG4P01861 327 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 LYL1P12980 280 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 VDAC1P21796 283 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 CDX1P47902 265 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-211ENST00000471260 EGFEM1PQ0D2K5 195 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 GNMTQ14749 295 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 MMDQ15546 238 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 KLHL30-AS1Q8NEE0 82 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 PPP1R1CQ8WVI7 109 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 DPF1Q92782 380 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 MRGPRFQ96AM1 343 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 P2RX4Q99571 388 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 ARPC5LQ9BPX5 153 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 NABP2Q9BQ15 211 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 NICN1Q9BSH3 213 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 CHMP1AQ9HD42 196 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-211ENST00000471260 TMA7Q9Y2S6 64 aaKnown RBP10.6□□□□□ -0.71
HMGN1-211ENST00000471260 KCNK7Q9Y2U2 307 aa10.6□□□□□ -0.71
HMGN1-211ENST00000471260 TEX46H3BTG2 121 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 SFT2D2O95562 160 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 GNB3P16520 340 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 EIF5AP63241 154 aaKnown RBP10.59□□□□□ -0.71
HMGN1-211ENST00000471260 CFHR3Q02985 330 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 KIR2DS1Q14954 304 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 NPBQ8NG41 125 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 OR8U1Q8NH10 309 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 IL1F10Q8WWZ1 152 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 EDARADDQ8WWZ3 215 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 CXorf58Q96LI9 332 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 HSPB9Q9BQS6 159 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 ZNF251Q9BRH9 671 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 GPR132Q9UNW8 380 aa10.59□□□□□ -0.71
HMGN1-211ENST00000471260 SAA2-SAA4A0A096LPE2 208 aa10.58□□□□□ -0.72
HMGN1-211ENST00000471260 A0A0A6YYD4 124 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms