RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 TMEM267Q0VDI3 215 aaPredicted RBP20.98■□□□□ 0.95
U2AF1-208ENST00000471250 SPANXN5Q5MJ07 72 aa20.98■□□□□ 0.95
U2AF1-208ENST00000471250 LDLRAD2Q5SZI1 272 aa20.98■□□□□ 0.95
U2AF1-208ENST00000471250 TPTE2P1Q5T6R2 138 aa20.98■□□□□ 0.95
U2AF1-208ENST00000471250 DPM3Q9P2X0 92 aa20.98■□□□□ 0.95
U2AF1-208ENST00000471250 PRNDQ9UKY0 176 aa20.98■□□□□ 0.95
U2AF1-208ENST00000471250 HOXB4P17483 251 aaPredicted RBP20.97■□□□□ 0.95
U2AF1-208ENST00000471250 DVL1P1P54792 670 aaPredicted RBP20.97■□□□□ 0.95
U2AF1-208ENST00000471250 TMEM14EPQ6UXP3 125 aa20.97■□□□□ 0.95
U2AF1-208ENST00000471250 OR5C1Q8NGR4 320 aa20.97■□□□□ 0.95
U2AF1-208ENST00000471250 PCNPQ8WW12 178 aaKnown RBP20.97■□□□□ 0.95
U2AF1-208ENST00000471250 MS4A7Q9GZW8 240 aaPredicted RBP20.97■□□□□ 0.95
U2AF1-208ENST00000471250 SLC25A32Q9H2D1 315 aa20.97■□□□□ 0.95
U2AF1-208ENST00000471250 NUP50Q9UKX7 468 aa20.97■□□□□ 0.95
U2AF1-208ENST00000471250 SPINK9Q5DT21 86 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 MOB3BQ86TA1 216 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 OR1S2Q8NGQ3 325 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 TCF19Q9Y242 345 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 RNASEK-C17orf49H0YIS7 233 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 TOX4O94842 621 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 METTL15P1P0C7V9 234 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 HSPE1P61604 102 aaKnown RBP20.96■□□□□ 0.95
U2AF1-208ENST00000471250 CLINT1Q14677 625 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 FAM74A1Q5RGS3 127 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 STPG2Q8N412 459 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 TMEM217Q8N7C4 229 aa20.96■□□□□ 0.95
U2AF1-208ENST00000471250 TET2Q6N021 2002 aaPredicted RBP20.95■□□□□ 0.94
U2AF1-208ENST00000471250 IGHV3-72A0A0B4J1Y9 119 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 A0A1W2PPI3 338 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 LINC00862A6NCI5 91 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 KBTBD11O94819 623 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 IGLV2-23P01705 113 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 NMBP08949 121 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 CEACAM3P40198 252 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 LGALS7P47929 136 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 KRTAP10-9P60411 292 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 ZNF266Q14584 549 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 OR4A5Q8NH83 315 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 OR4C12Q96R67 309 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 GINS3Q9BRX5 216 aa20.95■□□□□ 0.94
U2AF1-208ENST00000471250 STRAPQ9Y3F4 350 aaKnown RBP20.95■□□□□ 0.94
U2AF1-208ENST00000471250 VDAC2P45880 294 aaPredicted RBP20.94■□□□□ 0.94
U2AF1-208ENST00000471250 EIF5AL1Q6IS14 154 aaKnown RBP20.94■□□□□ 0.94
U2AF1-208ENST00000471250 HAPLN4Q86UW8 402 aa20.94■□□□□ 0.94
U2AF1-208ENST00000471250 VSTM2AQ8TAG5 236 aa20.94■□□□□ 0.94
U2AF1-208ENST00000471250 TMED6Q8WW62 240 aa20.94■□□□□ 0.94
U2AF1-208ENST00000471250 TBX15Q96SF7 602 aa20.94■□□□□ 0.94
U2AF1-208ENST00000471250 ZNF257Q9Y2Q1 563 aa20.94■□□□□ 0.94
U2AF1-208ENST00000471250 OR51B2Q9Y5P1 312 aa20.94■□□□□ 0.94
U2AF1-208ENST00000471250 ARL16Q0P5N6 197 aa20.93■□□□□ 0.94
U2AF1-208ENST00000471250 TMEM167AQ8TBQ9 72 aa20.93■□□□□ 0.94
U2AF1-208ENST00000471250 CLCC1Q96S66 551 aa20.93■□□□□ 0.94
U2AF1-208ENST00000471250 ATP5SQ99766 215 aa20.93■□□□□ 0.94
U2AF1-208ENST00000471250 FKBP11Q9NYL4 201 aa20.93■□□□□ 0.94
U2AF1-208ENST00000471250 FGF2P09038 288 aa20.93■□□□□ 0.94
U2AF1-208ENST00000471250 DFFBO76075 338 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 HBG1P69891 147 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 HBG2P69892 147 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 CLEC12BQ2HXU8 276 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 VMA21Q3ZAQ7 101 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 MINOS1Q5TGZ0 78 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 LHFPL4Q7Z7J7 247 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 PDZD9Q8IXQ8 264 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 RITA1Q96K30 269 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 HIPK2Q9H2X6 1198 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 LPAR2Q9HBW0 351 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 MINOS1-NBL1R4GNA1 71 aa20.92■□□□□ 0.94
U2AF1-208ENST00000471250 A0A1W2PRD5 423 aa20.91■□□□□ 0.94
U2AF1-208ENST00000471250 A0A1W2PRF3 423 aa20.91■□□□□ 0.94
U2AF1-208ENST00000471250 A0A1W2PRM7 423 aa20.91■□□□□ 0.94
U2AF1-208ENST00000471250 SLC25A16P16260 332 aa20.91■□□□□ 0.94
U2AF1-208ENST00000471250 USF1P22415 310 aaPredicted RBP20.91■□□□□ 0.94
U2AF1-208ENST00000471250 TSNAXQ99598 290 aaKnown RBP20.91■□□□□ 0.94
U2AF1-208ENST00000471250 LRRK2Q5S007 2527 aa20.91■□□□□ 0.94
U2AF1-208ENST00000471250 PMS2P5A8MQ11 134 aa20.9■□□□□ 0.94
U2AF1-208ENST00000471250 MYOD1P15172 320 aa20.9■□□□□ 0.94
U2AF1-208ENST00000471250 RPP30P78346 268 aaKnown RBP20.9■□□□□ 0.94
U2AF1-208ENST00000471250 PAX8Q06710 450 aa20.9■□□□□ 0.94
U2AF1-208ENST00000471250 HEYLQ9NQ87 328 aaPredicted RBP20.9■□□□□ 0.94
U2AF1-208ENST00000471250 BEX4Q9NWD9 120 aaPredicted RBP20.9■□□□□ 0.94
U2AF1-208ENST00000471250 CHD6Q8TD26 2715 aa20.9■□□□□ 0.94
U2AF1-208ENST00000471250 TEX50A0A1B0GTY4 177 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 OOSP1A8MZH6 123 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 CD1BP29016 333 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 HOXA1P49639 335 aaPredicted RBP20.89■□□□□ 0.94
U2AF1-208ENST00000471250 UBE2E1P51965 193 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 TEX45Q8NA69 505 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 OR5B3Q8NH48 314 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 LRRC20Q8TCA0 184 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 PSMG3-AS1Q96PY0 264 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 RNF5Q99942 180 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 HILPDAQ9Y5L2 63 aa20.89■□□□□ 0.94
U2AF1-208ENST00000471250 C15orf62A8K5M9 175 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 TIMM23O14925 209 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 FGF16O43320 207 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 FBXO24O75426 580 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 SEC11BP0C7V7 166 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 FAM157CP0CG43 387 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 SPP1P10451 314 aa20.89■□□□□ 0.93
U2AF1-208ENST00000471250 RPL8P62917 257 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms